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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5e6pA_

Fold library idPDB HeaderMoleculeTitle
c5e6pA_PDB header: signaling proteinChain: A: PDB Molecule: plexin-b2;PDBTitle: plexinb2 cytoplasmic region/pdz-rhogef pdz domain complex


Added to library: Sat Nov 21 08:23:39 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GIPTLDYKTYTDRVFFLPSKDGDKDVMITGKLDIPESRRPIVEQALYQFSNLLNSKSFLINFIHTLENQR
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Known secondary structure (DSSP)


B

TTBTTBSSSSTTTT




TTTTS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EFSARAKVYFASLLTVALHGKLEYYTDIMRTLFLELMEQYVVAKNPKLMLRRSETVVERMLSNWMSICLY
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Known secondary structure (DSSP)


T
TTTSS
TTSTTSS

ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence QYLKDSAGEPLYKLFKAIKHQVEKGPVDAVQKKAKYTLNDTGLLGDVEYAPLTVSVIVQDIDAIPVKVLN
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Known secondary structure (DSSP) TTTTTS
B
TTT

BSS
S
STTB








T
 .........220.........230.........240.........250.........260.........270.........280
Sequence CDTISQVKEKIIDQVYRTQPCSCWPKPDSVVLEWRPGSTQILSDLDLTSQREWKRINTLMHYNVRDGATL
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Known secondary structure (DSSP) TSBTTTS
GGGS

TTS

SS



SSSTT




BTTTTT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ILSKVRVWHLVRPTEIYLTRLLSVKGTLQQFVDNFFQSVLAHAVPPAVKYFFDFLDEQAEKHDIRDEDTI
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Known secondary structure (DSSP)


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TT


 .........360.........370.........380.........390.........400.........410.........420
Sequence HIWKTNSLPLRFWVNILKNPHFIFDVHVHEVVDASLSVIAQTFMDACTRTPSNKLLYAKEISTYKKMVED
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Known secondary structure (DSSP) TTTTT
GGGTBS



TT



SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence YYKGIRQMVQVSDQDMNTHLAEISRAHTDSLNTLVALHQLYQYTQKYYDEIINALEEDPAAQKMQLAFRL
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Known secondary structure (DSSP) TS



GGGS
TSTT
 .........500....
Sequence QQIAAALENKVTDL
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Known secondary structure (DSSP) T
SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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