Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5e6mA_

Fold library idPDB HeaderMoleculeTitle
c5e6mA_2.93PDB header: ligase/rnaChain: A: PDB Molecule: glycine--trna ligase;


Added to library: Sat Jul 23 08:27:14 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EEVLAPLRLAVRQQGDLVRKLKEDVDKAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRRFFYDQ
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)
TTTTTT






SS
S

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFVSFNL
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TTGGGT

TT

TT




STTTB




BS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAE
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) S

SSSSSS
S
STTTTTT
S



SS
BTGGGB
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKV
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)
GGG


TTGGGTTT

TT


TTSSS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GISPDKLRFRQHMENEMACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPKFQK
Predicted secondary structure


















































SS confidence





































































Known secondary structure (DSSP) T

GGG

GGG


TT

SST




SS




 .........360.........370.........380.........390.........400.........410.........420
Sequence TLYVEEVVPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKE
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)

S


SS
TT



TTT
S
SSSS
GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence LSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELP
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TT



SSS
TT
S
SSSS
TTT

TTT
 .........500.........510.........
Sequence SIVQDLANGNITWADVEARYPLFEGQETG
Predicted secondary structure







SS confidence




























Known secondary structure (DSSP) TSS
S
B



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D