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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5e5bA_

Fold library idPDB HeaderMoleculeTitle
c5e5bA_1.84PDB header: transcriptionChain: A: PDB Molecule: fact complex subunit spt16;


Added to library: Sat Feb 13 08:21:55 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AVTLDKDAYYRRVKRLYSNWRKGEDEYANVDAIVVSVGVDEEIVYAKSTALQTWLFGYELTDTIMVFCDD
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Known secondary structure (DSSP)




T
GGGTT
S


TT



SS

SS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFDKMIEAIKESKNGKKIGVFSKDK
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Known secondary structure (DSSP)

S
TT
GGGGGS



SSS

STTSS
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence FPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAVKEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEK
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Known secondary structure (DSSP)

STT


S

TTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence VRHSKLAESVEKAIEEKKYLAGADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGAITCAMGIRFKS
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Known secondary structure (DSSP)
BTTSGGGTTT

GGGSS


TT



SSSS


SSB

SS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YCSNLVRTLMVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGFG
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Known secondary structure (DSSP)

S



TT
B
GGGTTTB
S

 .........360.........370.........380.........390.........400.........410.........420
Sequence MGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVDEDGPATVLTSV
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Known secondary structure (DSSP)
SSSS

STT


B

TT

TT

S

SSSS




 .........430.
Sequence KKKVKNVGIFL
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Known secondary structure (DSSP)

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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