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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5e3pA_

Fold library idPDB HeaderMoleculeTitle
c5e3pA_PDB header: transferaseChain: A: PDB Molecule: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-PDBTitle: crystal strcuture of dapd from corynebacterium glutamicum


Added to library: Sat Nov 7 08:20:04 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTASATGIATLTSTGDVLDVWYPEIGSTDQSALTPLEGVDEDRNVTRKIVTTTIDIDAAPTDTYDAWLRL
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Known secondary structure (DSSP)
TT


SSSS



TTTGGG
TTTTTTS


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence HLLSHRVFRPHTINLDGIFGLLNNVVWTNFGPCAVDGFALTRARLSRRGQVTVYSVDKFPRMVDYVVPSG
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Known secondary structure (DSSP) TTSS
TTSS

TTGGGTS

TTSTTTTTS


SS
BGGGT


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VRIGDADRVRLGAYLADGTTVMHEGFVNFNAGTLGASMVEGRISAGVTVDDGTDVGGGASIMGTLSGGGQ
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Known secondary structure (DSSP)
SSGGGBBTT

TT

TT

TT
SSS

S
TT

TT

TT
S
TTS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HVISLGKRCLLGANSGCGIPLGDDCIIEAGLYITAGTKVLFDGSLHKASTLAGSNGLIFRRDSVSGQVVA
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Known secondary structure (DSSP) S


TT

TT

S


SS

TT

TT
TTGGGGTT
SSTTTT
 ....
Sequence VPNT
Predicted secondary structure

SS confidence



Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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