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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5e2fB_

Fold library idPDB HeaderMoleculeTitle
c5e2fB_PDB header: hydrolaseChain: B: PDB Molecule: beta-lactamase ybxi;PDBTitle: crystal structure of beta-lactamase class d from bacillus subtilis


Added to library: Sat Oct 17 08:28:37 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HLNVSKXNVDDEFKDTDGTFILHDLQKDQTFVYNRKRANQRQTPQSTFVVNALIGLQVKAVRDEYDVKRW
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Known secondary structure (DSSP)


GGG


TTTTTTS
TTTTSTS
B

GGG

TSS
STT


 .........80.........90.........100.........110.........120.........130.........140
Sequence DGVKREFESWNRDHTLGSAXRESAIWYYQALARDIGEERXKTWLHTLSYGNEDISGGIDQFWLQSSLTIS
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Known secondary structure (DSSP)
S


SSGGGSS
TT

TT
TT


TT
TTTTTSSSS

B
 .........150.........160.........170.........180.........190.........200.........210
Sequence PLEQETFLEKLAKEELPFDKPVXKIVKRXXIQEEGDHYTLYGKTGTRLTDXGLGWFVGFIKTEHGSYVFV
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Known secondary structure (DSSP) TT
SSS
T
SS
TTTT

TT
 .........220.........230......
Sequence TNVDDSGTKAKNITVDILKKYGLITS
Predicted secondary structure








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Known secondary structure (DSSP) SS
TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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