PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5e27B_

Fold library id	PDB Header	Molecule	Title
c5e27B_	PDB header: cell adhesion	Chain: B: PDB Molecule: resuscitation-promoting factor rpfb;	PDBTitle: the structure of resuscitation promoting factor b from m. tuberculosis2 reveals unexpected ubiquitin-like domains

Links to external resources
Added to library: Sat Nov 21 08:19:10 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K T V Q L N D G G L V R T V H L P A P N V A G L L S A A G V P L L Q S D H V V P A A T A P I V E G M Q I Q V T R N R I K K V T E R L P L P P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S T T
T T
S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N A R R V E D P E M N M S R E V V E D P G V P G T Q D V T F A V A E V N G V E T G R L P V A N V V V T P A H E A V V R V G T K P G T E V P P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T
B
T T
B
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V I D G S I W D A I A G C E A G G N W A I N T G N G Y Y G G V Q F D Q G T W E A N G G L R Y A P R A D L A T R E E Q I A V A E V T R L R Q G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T
T T
S S S
B T T T T B
T T G G G T
S S G G G S
T T T T T S S

. . . . . . . . . 220

Sequence W G A W P V C A A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S S T T
-

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	T	V	Q	L	N	D	G	G	L	V	R	T	V	H	L	P	A	P	N	V	A	G	L	L	S	A	A	G	V	P	L	L	Q	S	D	H	V	V	P	A	A	T	A	P	I	V	E	G	M	Q	I	Q	V	T	R	N	R	I	K	K	V	T	E	R	L	P	L	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T										S	S								T	T					T	T					S		T	T					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	A	R	R	V	E	D	P	E	M	N	M	S	R	E	V	V	E	D	P	G	V	P	G	T	Q	D	V	T	F	A	V	A	E	V	N	G	V	E	T	G	R	L	P	V	A	N	V	V	V	T	P	A	H	E	A	V	V	R	V	G	T	K	P	G	T	E	V	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S		T	T									B														T	T																	B										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	I	D	G	S	I	W	D	A	I	A	G	C	E	A	G	G	N	W	A	I	N	T	G	N	G	Y	Y	G	G	V	Q	F	D	Q	G	T	W	E	A	N	G	G	L	R	Y	A	P	R	A	D	L	A	T	R	E	E	Q	I	A	V	A	E	V	T	R	L	R	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S													S	T	T		T	T				S	S	S		B	T	T	T	T	B								T	T	G	G	G	T		S	S	G	G	G	S											T	T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	220
Sequence	W	G	A	W	P	V	C	A	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S		S	S	T	T		-