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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5e1vB_

Fold library idPDB HeaderMoleculeTitle
c5e1vB_1.87PDB header: oxidoreductaseChain: B: PDB Molecule: polyketide synthase pksl;


Added to library: Thu Feb 9 13:21:23 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NVKKITKQLTLSLKNPFIYHHVVYGQNVLPGLAYIDIIYQIFREHGFSCSELQLRNLSIYQPLTAEQDAV
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Known secondary structure (DSSP)

SSTTSTTT
GGGTT

GGG

S

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IVLNIQCAEKKEGQWQITAKGIEKRDGKEASEEKLYMKADMHADSPAIFEETLDLSQIKASAQNVVQLDD
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Known secondary structure (DSSP) TT
SSS






S





B

T
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VYEQCRRQELVHSEYMKAKGCIYEEEDGVLLELSLGSEAMLHAEGFMFHPTLIDGSGVGANHLLTSLLKG
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Known secondary structure (DSSP) TT
GGG

TT

TTGGG
SB
TTT
 .........220.........230.........240.........250.........260.........270....
Sequence EQRLYLPLFYESFSASALLQTDCMTRIKRSSVRREKELIYVTLEFFNASGEKVAELKNFTSKLV
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Known secondary structure (DSSP)

S
SS
B
SGGG
TT
TTSB


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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