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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5dzzA_

Fold library idPDB HeaderMoleculeTitle
c5dzzA_2.60PDB header: structural proteinChain: A: PDB Molecule: desmoplakin;


Added to library: Sat Mar 26 08:31:43 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TVDTSKLVFDGLRKKVTAMQLYECQLIDKTTLDKLLKGKKSVEEVASEIQPFLRGAGSIAGASASPKEKY
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Known secondary structure (DSSP)


GGG

SSSTTSS
TSS
TTST
S


SSSSS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLVEAKRKKLISPESTVMLLEAQAATGGIIDPHRNEKLTVDSAIARDLIDFDDRQQIYAAEKAITGFDDP
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Known secondary structure (DSSP)
TTSS
T
TTTT
TT
S
STT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence FSGKTVSVSEAIKKNLIDRETGMRLLEAQIASGGVVDPVNSVFLPKDVALARGLIDRDLYRSLNDPRDSQ
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Known secondary structure (DSSP) TT


TTSS
TTTSTTTT
TTSS
TS
TTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KNFVDPVTKKKVSYVQLKERCRIEPHTGLLLLSVQKRSMSFQGIRQPVTVTELVDSGILRPSTVNELESG
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Known secondary structure (DSSP)


SSS


TT
TTT









SSSTTSS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QISYDEVGERIKDFLQGSSCIAGIYNETTKQKLGIYEAMKIGLVRPGTALELLEAQAATGFIVDPVSNLR
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Known secondary structure (DSSP) SS
TS
S

TTTT
TSS
TTS
TTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPVEEAYKRGLVGIEFKEKLLSAERAVTGYNDPETGNIISLFQAMNKELIEKGHGIRLLEAQIATGGIID
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Known secondary structure (DSSP)
TTSS
STTT

TTT
S
TTSS
TTTS
 .........430.........440.........450.........460.........470.........480.........
Sequence PKESHRLPVDIAYKRGYFNEELSEILSDPSDDTKGFFDPNTEENLTYLQLKERCIKDEETGLCLLPLKE
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Known secondary structure (DSSP) TTTT
TTTSS
S

TTT

TTTT
TT

TTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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