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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5dwcA_

Fold library idPDB HeaderMoleculeTitle
c5dwcA_2.50PDB header: hydrolaseChain: A: PDB Molecule: type-2 restriction enzyme agei;


Added to library: Thu Feb 9 13:44:39 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRLDLDFLVAHVMLDNVSEEQYQQISDYFVPLVNKPKLKSRDAIGQAFVMATEVCPDANPSDLWHHVLYR
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Known secondary structure (DSSP)



TT

T
TT


TTS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IYIREKIGTDPSQSWVRTSGEAFEVALVERYNPVLARHGIRLTALFKGQKGLALTRMGVADRVGSRKVDV
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Known secondary structure (DSSP)

S

GGG
TTTT

TT

T

SS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence MIEKQGGGRSPDAEGFGVVGGIHAKVSLAERVSDDIPASRIMMGEGLLSVLSTLDVKSFPPPHGDLVNRG
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Known secondary structure (DSSP) S
SBS

TT
S
TTSSGGGSTT







TTT






 .........220.........230.........240.........250.........260.........270...
Sequence ELGTPDRPSDKRNYIEGHGDFSAFSYNLRTSPSNATTPSGRHIYVSGFSGQDDEFTDYLVAQL
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Known secondary structure (DSSP) S


TTS

TT

S


B

TTS



S

SSS



B

S
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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