PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5dt9A_

Fold library id	PDB Header	Molecule	Title
c5dt9A_	PDB header: oxidoreductase	Chain: A: PDB Molecule: erythronate-4-phosphate dehydrogenase;	PDBTitle: crystal structure of a putative d-erythronate-4-phosphate2 dehydrogenase from vibrio cholerae

Links to external resources
Added to library: Sat Oct 3 08:31:27 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I P T M K I L I D E N M P Y A Q A L F S Q L G E V I L K P G R T L T A D D L I D V D A L M I R S V T K V N D A L L A K A N R L K F V G T A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T T T T
G G G
G G G G T T
S
S S S
B
T T T T T T
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A G M D H V D Q A L L R E R G I F F T A A P G C N K V G V A E Y V F S V L M V L A Q Q Q G F S V F D K T V G I I G A G Q V G S Y L A K C L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T B
T T
T T T T T
G G G
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G I G M K V L L N D P P K Q A Q G D E R E F T E L E T L L K Q A D V I T L H T P I T R G G E W P T H H L I D A A I L E Q L R S D Q I L I N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T
S
S
S S S S S
T T S B
T T S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A R G P V V D N A A L K A R L Q Q G D G F T A V L D V F E F E P Q V D M E L L P L L A F A T P H I A G Y G L E G K A R G T T M I F N S Y C E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G B
T T
S S
S S
T B T T B
T T T G G G S S
S S
T T
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence F L G S A H C A N P A S L L P K A P V P K V Y L E R A W D E E T L R T L T Q I I Y D V R K D D A Q F R R E I H Q P G A F D L M R K H Y W D R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S
S S
T T S T T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . .

Sequence R E Y S A V T L A G G A D C H L A P L A K L G F Q V E V C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
T T S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	P	T	M	K	I	L	I	D	E	N	M	P	Y	A	Q	A	L	F	S	Q	L	G	E	V	I	L	K	P	G	R	T	L	T	A	D	D	L	I	D	V	D	A	L	M	I	R	S	V	T	K	V	N	D	A	L	L	A	K	A	N	R	L	K	F	V	G	T	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	T	T						T	T	T								G	G	G			G	G	G	G	T	T		S						S	S	S		B		T	T	T	T	T	T		S	S							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	G	M	D	H	V	D	Q	A	L	L	R	E	R	G	I	F	F	T	A	A	P	G	C	N	K	V	G	V	A	E	Y	V	F	S	V	L	M	V	L	A	Q	Q	Q	G	F	S	V	F	D	K	T	V	G	I	I	G	A	G	Q	V	G	S	Y	L	A	K	C	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T	B								T	T							T	T	T	T																				T			G	G	G									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	I	G	M	K	V	L	L	N	D	P	P	K	Q	A	Q	G	D	E	R	E	F	T	E	L	E	T	L	L	K	Q	A	D	V	I	T	L	H	T	P	I	T	R	G	G	E	W	P	T	H	H	L	I	D	A	A	I	L	E	Q	L	R	S	D	Q	I	L	I	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T														T			S													S										S	S	S	S	S			T	T	S	B						T	T	S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	R	G	P	V	V	D	N	A	A	L	K	A	R	L	Q	Q	G	D	G	F	T	A	V	L	D	V	F	E	F	E	P	Q	V	D	M	E	L	L	P	L	L	A	F	A	T	P	H	I	A	G	Y	G	L	E	G	K	A	R	G	T	T	M	I	F	N	S	Y	C	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		G	G	G	B										T	T		S	S						S	S		T	B	T	T	B			T	T	T	G	G	G	S	S				S	S		T	T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	L	G	S	A	H	C	A	N	P	A	S	L	L	P	K	A	P	V	P	K	V	Y	L	E	R	A	W	D	E	E	T	L	R	T	L	T	Q	I	I	Y	D	V	R	K	D	D	A	Q	F	R	R	E	I	H	Q	P	G	A	F	D	L	M	R	K	H	Y	W	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T											S				S	S						S	S																												T	T	S	T	T								T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Sequence	R	E	Y	S	A	V	T	L	A	G	G	A	D	C	H	L	A	P	L	A	K	L	G	F	Q	V	E	V	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	S						T	T	S									T