Fold library entry viewer: c5dseC_

Added to library: Sat Dec 5 09:55:16 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	R	L	E	T	E	I	E	R	C	R	S	E	C	Q	W	E	R	I	P	E	L	V	K	Q	L	L	I	A	N	D	D	M	A	E	L	L	L	G	E	S	K	L	E	Q	Y	L	K	E	H	P	L	R	Q	G	A	S	P	R	G	P	K	P	Q	L	T	E	V	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		T	T	T											S			S																		S				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	L	T	A	A	L	D	R	G	N	L	K	S	E	F	L	Q	E	S	N	L	I	M	A	K	L	N	Y	V	E	G	D	Y	K	E	A	L	N	I	Y	A	R	V	G	L	D	D	L	P	L	T	A	V	P	P	Y	R	L	R	V	I	A	E	A	Y	A	T	K	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S																				T														G	G	G	S			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	L	E	K	L	P	D	R	E	Q	D	V	I	T	C	Y	E	K	A	G	D	I	A	L	L	Y	L	Q	E	I	E	R	V	I	L	S	E	L	G	F	F	L	E	T	G	L	Q	R	A	H	V	L	Y	F	K	N	G	N	L	T	R	G	V	G	R	F	R	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	A	V	E	T	R	T	T	Q	N	L	R	M	T	I	A	R	Q	L	A	E	I	L	L	R	G	M	C	E	Q	S	Y	W	N	P	L	E	D	P	P	C	Q	S	P	L	N	T	K	T	Y	T	L	T	R	R	A	R	V	Y	S	G	E	N	I	F	C	P	Q	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B				T	T	T																		T			G	G	G				T	T	S				S	S							S				S					B				T	T	S					S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	E	E	A	L	L	L	L	L	I	S	E	S	M	A	N	R	D	L	Q	S	A	S	V	V	Y	D	L	L	T	I	A	L	G	R	R	G	Q	Y	E	M	L	S	E	C	L	E	R	A	M	K	F	A	F	E	E	F	H	L	W	Y	Q	F	A	L	S	L	M	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T																		T	T	T													G	G	G		S	S															T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	K	S	A	R	A	V	K	V	L	K	E	C	I	R	L	K	P	D	D	A	T	I	P	L	L	A	A	K	L	C	M	G	S	L	H	W	L	E	E	A	E	K	F	A	K	T	V	V	D	V	T	S	E	F	K	A	K	G	Y	L	A	L	G	L	T	Y	S	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																	S	S		S											T	T	T	S																		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	T	D	A	S	L	R	G	M	Q	E	V	L	Q	R	K	A	L	L	A	F	Q	R	A	H	S	L	S	P	T	D	H	Q	A	A	F	Y	L	A	L	Q	L	A	I	S	R	Q	I	P	E	A	L	G	Y	V	R	Q	A	L	Q	L	Q	G	D	D	A	N	S	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S																							T	T															T	T																	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	L	A	L	L	L	S	A	Q	K	H	Y	H	D	A	L	N	I	I	D	M	A	L	S	E	Y	P	E	N	F	I	L	L	F	S	K	V	K	L	Q	S	L	C	R	G	P	D	E	A	L	L	T	C	K	H	M	L	Q	I	W	K	S	C	Y	N	G	P	L	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T																	T	T																T																								S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	W	M	T	L	A	Q	I	W	L	H	A	A	E	V	Y	I	G	I	G	K	P	A	E	A	T	A	C	T	Q	E	A	A	N	L	F	P	M	S	H	N	V	L	Y	M	R	G	Q	I	A	E	L	R	G	S	M	D	E	A	R	R	W	Y	E	E	A	L	A	I	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T														T	T		T	T																T																	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	H	V	K	S	M	Q	R	L	A	L	I	L	H	Q	L	G	R	Y	S	L	A	E	K	I	L	R	D	A	V	Q	V	N	S	T	A	H	E	V	W	N	G	L	G	E	V	L	Q	A	Q	G	N	D	A	A	A	T	E	C	F	L	T	A	L	E	L	E	A	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T															T	T																	T	T																T																	T	T
	.	.	.	.	.	.	.	.	.	710	.	.
Sequence	P	A	V	P	F	T	I	I	P	R	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		G	G	G	S

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PDB structure

FASTA sequence

Hidden Markov model

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