PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5dqsA_

Fold library id	PDB Header	Molecule	Title
c5dqsA_	2.10	PDB header: translation	Chain: A: PDB Molecule: elongation factor 1-gamma;

Links to external resources
Added to library: Fri Feb 10 01:16:37 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X A A G T L Y T Y P E N W R A F K A L I A A Q Y S G A Q V R V L S A F G Q T N R T P E F L R K F P A G K V P A F E G D D G F C V F E S N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S G G G S
T T
S S T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I A Y Y V S N E E L R G S T P E A A A Q V V Q W V S F A D S D I V P P A S T W V F P T L G I X H H N K Q A T E N A K E E V R R I L G L L D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y L K T R T F L V G E R V T L A D I T V V C T L L W L Y K Q V L E P S F R Q A F P N T N R W F L T C I N Q P Q F R A V L G E V K L C E K X A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S S S T T S
T
T T
T S
S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	A	A	G	T	L	Y	T	Y	P	E	N	W	R	A	F	K	A	L	I	A	A	Q	Y	S	G	A	Q	V	R	V	L	S	A	F	G	Q	T	N	R	T	P	E	F	L	R	K	F	P	A	G	K	V	P	A	F	E	G	D	D	G	F	C	V	F	E	S	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																										S	G	G	G	S								T	T			S	S					T	T	S					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	A	Y	Y	V	S	N	E	E	L	R	G	S	T	P	E	A	A	A	Q	V	V	Q	W	V	S	F	A	D	S	D	I	V	P	P	A	S	T	W	V	F	P	T	L	G	I	X	H	H	N	K	Q	A	T	E	N	A	K	E	E	V	R	R	I	L	G	L	L	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S							S	S																		T													T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	L	K	T	R	T	F	L	V	G	E	R	V	T	L	A	D	I	T	V	V	C	T	L	L	W	L	Y	K	Q	V	L	E	P	S	F	R	Q	A	F	P	N	T	N	R	W	F	L	T	C	I	N	Q	P	Q	F	R	A	V	L	G	E	V	K	L	C	E	K	X	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S		S	S	S	S	T	T	S																			T							T	T													T	S									S					S	S