PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5douC_

Fold library id	PDB Header	Molecule	Title
c5douC_	PDB header: ligase	Chain: C: PDB Molecule: carbamoyl-phosphate synthase [ammonia], mitochondrial;	PDBTitle: crystal structure of human carbamoyl phosphate synthetase i (cps1),2 ligand-bound form

Links to external resources
Added to library: Sat Dec 12 08:35:22 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A Q T A H I V L E D G T K M K G Y S F G H P S S V A G E V V F N T G L G G Y P E A I T D P A Y K G Q I L T M A N P I I G N G G A P D T T A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
S S
S
T
G G G B T S S S
T T
B
S S
B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D E L G L S K Y L E S N G I K V S G L L V L D Y S K D Y N H W L A T K S L G Q W L Q E E K V P A I Y G V D T R M L T K I I R D K G T M L G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S B S S
S S S S
B S
S
S S
T T
B
T T
S S
T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I E F E G Q P V D F V D P N K Q N L I A E V S T K D V K V Y G K G N P T K V V A V D C G I K N N V I R L L V K R G A E V H L V P W N H D F T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B T T B
G G G S
S
S S
S T T
S S
T T
T T
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence K M E Y D G I L I A G G P G N P A L A E P L I Q N V R K I L E S D R K E P L F G I S T G N L I T G L A A G A K T Y K M S M A N R G Q N Q P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S
G G G
S S
T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence L N I T N K Q A F I T A Q N H G Y A L D N T L P A G W K P L F V N V N D Q T N E G I M H E S K P F F A V Q F H P E V T P G P I D T E Y L F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
T T
T T T
B
S S S S S S
T T
S S S
S S T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence S F F S L I K K G K A T T I T S V L P K P A S R V E V S K V L I L G S G G L S I G Q A G E F D Y S G S Q A V K A M K E E N V K T V L M N P N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T G G G S
S
S
B T T B
T T T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence I A S V Q T N E V G L K Q A D T V Y F L P I T P Q F V T E V I K A E Q P D G L I L G M G G Q T A L N C G V E L F K R G V L K E Y G V K V L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G
S S S T T S
S
S
S
S
S S S T T T T
S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence T S V E S I M A T E D R Q L F S D K L N E I N E K I A P S F A V E S I E D A L K A A D T I G Y P V M I R S A Y A L G G L G S G I C P N R E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T
S S S
S S S S
T T T T
S S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence L M D L S T K A F A M T N Q I L V E K S V T G W K E I E Y E V V R D A D D N C V T V C N M E N V D A M G V H T G D S V V V A P A Q T L S N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T S
T T
S S
T T S
G G G S
S
S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence E F Q M L R R T S I N V V R H L G I V G E C N I Q F A L H P T S M E Y C I I E V N A R L S R S S A L A S K A T G Y P L A F I A A K I A L G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S S
S
S
T T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence P L P E I K N V V S G K T S A C F E P S L D Y M V T K I P R W D L D R F H G T S S R I G S S M K S V G E V M A I G R T F E E S F Q K A L R M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S B
T T T S S S B S
S
B
S S
T T
T T S
S B
S S
S S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence C H P S I E G F T P R L P M N K E W P S N L D L R K E L S E P S S T R I Y A I A K A I D D N M S L D E I E K L T Y I D K W F L Y K M R D I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
S S
G G G
T T
S
B T T T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence N M E K T L K G L N S E S M T E E T L K R A K E I G F S D K Q I S K C L G L T E A Q T R E L R L K K N I H P W V K Q I D T L A A E Y P S V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T
T T
T
T T
S B T T S S
S S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence N Y L Y V T Y N G Q E H D V N F D D H G M M V L G C G P Y H I G S S V E F D W C A V S S I R T L R Q L G K K T V V V N C N P E T V S T D F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S S
S
B T T B
T T T
T T
S T T
G G

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence E C D K L Y F E E L S L E R I L D I Y H Q E A C G G C I I S V G G Q I P N N L A V P L Y K N G V K I M G T S P L Q I D R A E D R S I F S A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G S S
S T
S
S S S
T T T
B
S S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence L D E L K V A Q A P W K A V N T L N E A L E F A K S V D Y P C L L R P A M N V V F S E D P V V L T K F V E G A R E V E M D A V G K D G R V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
B
S S
S
S
S
T T

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence S H A I S E H V E D A G V H S G D A T L M L P T Q T I S Q G A I E K V K D A T R K I A K A F A I S G P F N V Q F L V K G N D V L V I E C N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S
G G G S
S
S S
T T
T T S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence R A S R S F P F V S K T L G V D F I D V A T K V M I G E N V D E K H L P T L D H P I I P A D Y V A I K A P M F S W P R L R D A D P I L R C E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T
T T
T T S
S S S
S S
T T T S T T
S S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence M A S T G E V A C F G E G I H T A F L K A M L S T G F K I P Q K G I L I G I Q Q S F R P R F L G V A E Q L H N E G F K L F A T E A T S D W L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
S S
G G G T T

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence N A N N V P A T P V A W P S Q E G Q N P S L S S I R K L I R D G S I D L V I N L P N N N T K F V H D N Y V I R R T A V D S G I P L L T N F Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B
G G G T T S
T T S B
T T S
T T
S
T

. . . . . . . . . 1410 . . . . . . . . . 1420 .

Sequence V T K L F A E A V Q K D S K S L F H Y R Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	Q	T	A	H	I	V	L	E	D	G	T	K	M	K	G	Y	S	F	G	H	P	S	S	V	A	G	E	V	V	F	N	T	G	L	G	G	Y	P	E	A	I	T	D	P	A	Y	K	G	Q	I	L	T	M	A	N	P	I	I	G	N	G	G	A	P	D	T	T	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S									S		S	S													S							T		G	G	G	B	T						S	S	S				T	T		B			S	S		B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	E	L	G	L	S	K	Y	L	E	S	N	G	I	K	V	S	G	L	L	V	L	D	Y	S	K	D	Y	N	H	W	L	A	T	K	S	L	G	Q	W	L	Q	E	E	K	V	P	A	I	Y	G	V	D	T	R	M	L	T	K	I	I	R	D	K	G	T	M	L	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S	B	S	S		S	S	S	S			B	S					S				S	S				T	T			B									T	T						S	S										T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	E	F	E	G	Q	P	V	D	F	V	D	P	N	K	Q	N	L	I	A	E	V	S	T	K	D	V	K	V	Y	G	K	G	N	P	T	K	V	V	A	V	D	C	G	I	K	N	N	V	I	R	L	L	V	K	R	G	A	E	V	H	L	V	P	W	N	H	D	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	T	T	B							G	G	G	S							S		S	S					S	T	T		S									S												T	T								T	T				T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	M	E	Y	D	G	I	L	I	A	G	G	P	G	N	P	A	L	A	E	P	L	I	Q	N	V	R	K	I	L	E	S	D	R	K	E	P	L	F	G	I	S	T	G	N	L	I	T	G	L	A	A	G	A	K	T	Y	K	M	S	M	A	N	R	G	Q	N	Q	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				S								S	S		G	G	G														S	S																				T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	N	I	T	N	K	Q	A	F	I	T	A	Q	N	H	G	Y	A	L	D	N	T	L	P	A	G	W	K	P	L	F	V	N	V	N	D	Q	T	N	E	G	I	M	H	E	S	K	P	F	F	A	V	Q	F	H	P	E	V	T	P	G	P	I	D	T	E	Y	L	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T																S				T	T								T	T	T			B						S	S	S	S					S	S		T	T		S	S	S			S	S	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	F	F	S	L	I	K	K	G	K	A	T	T	I	T	S	V	L	P	K	P	A	S	R	V	E	V	S	K	V	L	I	L	G	S	G	G	L	S	I	G	Q	A	G	E	F	D	Y	S	G	S	Q	A	V	K	A	M	K	E	E	N	V	K	T	V	L	M	N	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S			T	G	G	G	S										S									S		B	T	T	B		T																T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	A	S	V	Q	T	N	E	V	G	L	K	Q	A	D	T	V	Y	F	L	P	I	T	P	Q	F	V	T	E	V	I	K	A	E	Q	P	D	G	L	I	L	G	M	G	G	Q	T	A	L	N	C	G	V	E	L	F	K	R	G	V	L	K	E	Y	G	V	K	V	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		G	G	G		S	S	S	T	T	S		S					S			S														S					S	S	S														T	T					T	T					S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	S	V	E	S	I	M	A	T	E	D	R	Q	L	F	S	D	K	L	N	E	I	N	E	K	I	A	P	S	F	A	V	E	S	I	E	D	A	L	K	A	A	D	T	I	G	Y	P	V	M	I	R	S	A	Y	A	L	G	G	L	G	S	G	I	C	P	N	R	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										S											T	T					S					S	S													S	S						S	S			T	T	T	T					S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	M	D	L	S	T	K	A	F	A	M	T	N	Q	I	L	V	E	K	S	V	T	G	W	K	E	I	E	Y	E	V	V	R	D	A	D	D	N	C	V	T	V	C	N	M	E	N	V	D	A	M	G	V	H	T	G	D	S	V	V	V	A	P	A	Q	T	L	S	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S									T	T	S											T	T												S	S		T	T	S		G	G	G	S					S		S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	F	Q	M	L	R	R	T	S	I	N	V	V	R	H	L	G	I	V	G	E	C	N	I	Q	F	A	L	H	P	T	S	M	E	Y	C	I	I	E	V	N	A	R	L	S	R	S	S	A	L	A	S	K	A	T	G	Y	P	L	A	F	I	A	A	K	I	A	L	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T													T	T	S	S										S													S											T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	P	L	P	E	I	K	N	V	V	S	G	K	T	S	A	C	F	E	P	S	L	D	Y	M	V	T	K	I	P	R	W	D	L	D	R	F	H	G	T	S	S	R	I	G	S	S	M	K	S	V	G	E	V	M	A	I	G	R	T	F	E	E	S	F	Q	K	A	L	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S	B		T	T	T	S	S	S	B	S		S			B		S	S											T	T		T	T	S		S	B			S	S				S								S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	C	H	P	S	I	E	G	F	T	P	R	L	P	M	N	K	E	W	P	S	N	L	D	L	R	K	E	L	S	E	P	S	S	T	R	I	Y	A	I	A	K	A	I	D	D	N	M	S	L	D	E	I	E	K	L	T	Y	I	D	K	W	F	L	Y	K	M	R	D	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S	S		S	S		G	G	G					T	T									S		B	T	T											T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	N	M	E	K	T	L	K	G	L	N	S	E	S	M	T	E	E	T	L	K	R	A	K	E	I	G	F	S	D	K	Q	I	S	K	C	L	G	L	T	E	A	Q	T	R	E	L	R	L	K	K	N	I	H	P	W	V	K	Q	I	D	T	L	A	A	E	Y	P	S	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T			T	T	T												T	T											T													T	T										S	B	T	T	S	S			S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	N	Y	L	Y	V	T	Y	N	G	Q	E	H	D	V	N	F	D	D	H	G	M	M	V	L	G	C	G	P	Y	H	I	G	S	S	V	E	F	D	W	C	A	V	S	S	I	R	T	L	R	Q	L	G	K	K	T	V	V	V	N	C	N	P	E	T	V	S	T	D	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S		S	S		S	S														S		B	T	T	B		T																T	T										T	T		S	T	T		G	G
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	E	C	D	K	L	Y	F	E	E	L	S	L	E	R	I	L	D	I	Y	H	Q	E	A	C	G	G	C	I	I	S	V	G	G	Q	I	P	N	N	L	A	V	P	L	Y	K	N	G	V	K	I	M	G	T	S	P	L	Q	I	D	R	A	E	D	R	S	I	F	S	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S	S								S												T		S					S	S	S							T							T	T			B		S	S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	L	D	E	L	K	V	A	Q	A	P	W	K	A	V	N	T	L	N	E	A	L	E	F	A	K	S	V	D	Y	P	C	L	L	R	P	A	M	N	V	V	F	S	E	D	P	V	V	L	T	K	F	V	E	G	A	R	E	V	E	M	D	A	V	G	K	D	G	R	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T			B							S	S													S													S												S												T	T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	S	H	A	I	S	E	H	V	E	D	A	G	V	H	S	G	D	A	T	L	M	L	P	T	Q	T	I	S	Q	G	A	I	E	K	V	K	D	A	T	R	K	I	A	K	A	F	A	I	S	G	P	F	N	V	Q	F	L	V	K	G	N	D	V	L	V	I	E	C	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S		T	T	S		G	G	G	S					S		S	S																				T	T													T	T									S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	R	A	S	R	S	F	P	F	V	S	K	T	L	G	V	D	F	I	D	V	A	T	K	V	M	I	G	E	N	V	D	E	K	H	L	P	T	L	D	H	P	I	I	P	A	D	Y	V	A	I	K	A	P	M	F	S	W	P	R	L	R	D	A	D	P	I	L	R	C	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T									T												T	T						T	T	S			S	S	S					S	S											T	T	T	S	T	T							S	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	M	A	S	T	G	E	V	A	C	F	G	E	G	I	H	T	A	F	L	K	A	M	L	S	T	G	F	K	I	P	Q	K	G	I	L	I	G	I	Q	Q	S	F	R	P	R	F	L	G	V	A	E	Q	L	H	N	E	G	F	K	L	F	A	T	E	A	T	S	D	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S												T	T					S	S								G	G	G														T	T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	N	A	N	N	V	P	A	T	P	V	A	W	P	S	Q	E	G	Q	N	P	S	L	S	S	I	R	K	L	I	R	D	G	S	I	D	L	V	I	N	L	P	N	N	N	T	K	F	V	H	D	N	Y	V	I	R	R	T	A	V	D	S	G	I	P	L	L	T	N	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T						B			G	G	G	T	T	S		T	T	S	B								T	T	S										T	T		S																T
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.
Sequence	V	T	K	L	F	A	E	A	V	Q	K	D	S	K	S	L	F	H	Y	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T