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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5do7B_

Fold library idPDB HeaderMoleculeTitle
c5do7B_3.93PDB header: transport proteinChain: B: PDB Molecule: atp-binding cassette sub-family g member 8;


Added to library: Sat May 21 11:35:02 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LQDRLFSSESDNSLYFTYSGQPGIQNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKIKSGQIWI
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Known secondary structure (DSSP)




S















TT



TTSST

SSSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence NGQPSSPQLVRKCVAHVRQHNQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCADTR
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Known secondary structure (DSSP) TTB





S




TT
BS
TTS
TTTT
TTTTTSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence VGNMYVRGLSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAKGNRLVLISLHQPRS
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Known secondary structure (DSSP)



S
TTGGG

SSTTTTS
TT

SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence DIFRLFDLVLLMTSGTPIYLGAAQHMVQYFTAIGYPCPRYSNPADFYAQSLAALFLEKVRDLDDFLWKAE
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Known secondary structure (DSSP) T
STTGGGS


SS
SS


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence TKGAVQQFTTLIRRQISNDFRDLPTLLIHGAEACLMSMTIGFLYFGHGSIQLSFMDTAALLFMIGALIPF
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Known secondary structure (DSSP)


T

SSSS


ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence NVILDVISKCYSERAMLYYELEDGLYTTGPYFFAKILGELPEHCAYIIIYGMPTYWLANLRPGLQPFLLH
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Known secondary structure (DSSP) T

TS

SSSSSTTT
SSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FLLVWLVVFCCRIMALAAAALLPTFHMASFFSNALYNSFYLAGGFMINLSSLWTVPAWISKVSFLRWCFE
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Known secondary structure (DSSP) SS
S
SSS

TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence GLMKIQFSRRTYKMPLGNLTIAVSGDKILSVMELDSYPLYAIYLIVIGLSGGFMVLYYVSLRFIKQKPSQ
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Known secondary structure (DSSP) STT



STT



TTGGGGS
TTS




S
 ..
Sequence DW
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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