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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5dn8A_

Fold library idPDB HeaderMoleculeTitle
c5dn8A_PDB header: gtp-binding proteinChain: A: PDB Molecule: gtpase der;PDBTitle: 1.76 angstrom crystal structure of gtp-binding protein der from2 coxiella burnetii in complex with gdp.


Added to library: Sat Oct 17 09:23:24 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AMLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGLVETQVEQAI
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Known secondary structure (DSSP)





TTSSS


TT
SS





SSTTGGGT

 .........80.........90.........100.........110.........120.........130.........140
Sequence DESDCILFLVDAKAGLVPADEIIAERLRKKGKKIFLAVNKADRARAAVVQSDFYKLGFGEPYVIAAASGR
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Known secondary structure (DSSP)
STTT
S
SSS

TTS
GGGGGG
SS


BTTTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVKDLMTQVLENLPEVGIKIAMIGRPNVGKSTLINRLLGEERVIVYDSIYIPFARNDENYTLIDTAGIRR
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Known secondary structure (DSSP) TT





STTSSTTSTT

TTTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RAKIQKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIAVNKWDGLNIEERDNVRN
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Known secondary structure (DSSP)




STTT
S
T


TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence AIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQELTTGQLTRALEKAVAEHEPPLVKGRRIR
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Known secondary structure (DSSP)
GGGTTS

TTT
TTTTS


S


TT
 .........360.........370.........380.........390.........400.....
Sequence LRYAHLGARHPLTIVVHGKQTKSLPQSYSRYLANYFRKTFNFIGVPVHIKLKTDP
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Known secondary structure (DSSP) TTSGGGS
T

SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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