PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5dn6G_

Fold library id	PDB Header	Molecule	Title
c5dn6G_	PDB header: hydrolase	Chain: G: PDB Molecule: atp synthase gamma chain;	PDBTitle: atp synthase from paracoccus denitrificans

Links to external resources
Added to library: Sat Oct 31 08:23:58 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S L K D L K N R I G S V K N T R K I T K A M Q M V A A A K L R R A Q E A A E A A R P Y A D R M A A V M A G L T A A A A G M A P R L L A G T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H L L V V M T S E R G L A G G F N S S I V K L A R L R L Q E L Q A V S I L T V G K K G R E Q L K R E Y G D L F V N H V D L S R I G Y D N A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T
S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A I A D E I L D R F D N D V A T L F Y N R F E S V I S Q V P T A R Q V I P A V I E E P D E N A I L N D L L P R S V A T Q V F A A L L E N A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260

Sequence S E Q G A R M T A M D N A T R N A G D M I D R L T T V Y N R S R Q A A I T K E L I E I I S G A E A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	K	D	L	K	N	R	I	G	S	V	K	N	T	R	K	I	T	K	A	M	Q	M	V	A	A	A	K	L	R	R	A	Q	E	A	A	E	A	A	R	P	Y	A	D	R	M	A	A	V	M	A	G	L	T	A	A	A	A	G	M	A	P	R	L	L	A	G	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																									T								G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	L	L	V	V	M	T	S	E	R	G	L	A	G	G	F	N	S	S	I	V	K	L	A	R	L	R	L	Q	E	L	Q	A	V	S	I	L	T	V	G	K	K	G	R	E	Q	L	K	R	E	Y	G	D	L	F	V	N	H	V	D	L	S	R	I	G	Y	D	N	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S			S	T	T																									S																										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	I	A	D	E	I	L	D	R	F	D	N	D	V	A	T	L	F	Y	N	R	F	E	S	V	I	S	Q	V	P	T	A	R	Q	V	I	P	A	V	I	E	E	P	D	E	N	A	I	L	N	D	L	L	P	R	S	V	A	T	Q	V	F	A	A	L	L	E	N	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S		S	S											S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Sequence	S	E	Q	G	A	R	M	T	A	M	D	N	A	T	R	N	A	G	D	M	I	D	R	L	T	T	V	Y	N	R	S	R	Q	A	A	I	T	K	E	L	I	E	I	I	S	G	A	E	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																	T