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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5dmuA_

Fold library idPDB HeaderMoleculeTitle
c5dmuA_PDB header: transferaseChain: A: PDB Molecule: nhej polymerase;PDBTitle: structure of the nhej polymerase from methanocella paludicola


Added to library: Sat Oct 10 08:21:54 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GLVPRGSHMTEVLHIEGHDIKVTNPDKVLFPEDGITKGELVDYYRRISGVMVPLVRGRPMTMQRFPDGIG
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Known secondary structure (DSSP)
B


S

STTSTTBTTTTTT

TT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEGFFQKEASDYFPDWVHRATLELGKGGIQHQVVCDDAATLVYLASQAMITPHVFLSRIDKVHYPDRLIF
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Known secondary structure (DSSP) S


S

TTS
TTS

TTSS

STTSS
GGGTTS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DLDPPDNNFETVRSAAKTIREALDAEGYPVYLMTTGSRGLHVVVPLDRSADFDTVRAFARGFGEKLTKKY
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Known secondary structure (DSSP)

TTS
TT



SSS
B
S
S
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PDRFTIELSKEKRRGRLFLDYLRNSYGQTGVAPYGVRARSGAPVATPITWDELDDISGSQEYNIRNIMGR
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Known secondary structure (DSSP) TTT

SSTTTTTT

B
TTSSTT

TT
B
SSTT
BB

B

TT

STTS
BTTT
 .........290.........300.
Sequence MDKRGDAWKYIDKDRTSIKNL
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Known secondary structure (DSSP)

TTTTGGGG
B

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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