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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c5dmjD_ | 2.79 | PDB header: immune system/signaling protein | Chain: D: PDB Molecule: tumor necrosis factor receptor superfamily member 5; |
| Added to library: Sat Jun 4 08:17:25 2016 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | T | A | C | R | E | K | Q | Y | L | I | N | S | Q | C | C | S | L | C | Q | P | G | Q | K | L | V | S | D | C | T | E | F | T | E | T | E | C | L | P | C | G | E | S | E | F | L | D | T | W | N | R | E | T | H | C | H | Q | H | K | Y | C | D | P | N | L | G | L | R | V | Q | Q |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | T | T | T | B | S | S | S | B | B | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | S | B | S | S | ![]() | ![]() | G | G | G | T | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
| Sequence | K | G | T | S | E | T | D | T | I | C | T | C | E | E | G | W | H | C | T | S | E | A | C | E | S | C | V | L | H | R | S | C | S | P | G | F | G | V | K | Q | I | A | T | G | V | S | D | T | I | C | E | P | C | P | V | G | F | F | S | D | V | S | S | A | F | E | K | C | H | P |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | S | ![]() | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | S | S | T | T | S | ![]() | ![]() | S | B | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | B | S | S | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
| Sequence | W | T | S | C | E | T | K | D | L | V | V | Q | Q | A | G | T | D | K | T | D | V | V | C | G | P | Q | D | |||||||||||||||||||||||||||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S | S | S | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() |
| Download: | PDB structure | FASTA sequence |
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