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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5dm70_ | PDB header: ribosome | Chain: 0: PDB Molecule: 50s ribosomal protein l1; | PDBTitle: crystal structure of the 50s ribosomal subunit from deinococcus2 radiodurans in complex with hygromycin a |
Added to library: Sat Nov 14 08:16:53 2015 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | K | R | Y | R | A | L | E | G | K | V | D | R | N | K | Q | Y | S | I | D | E | A | A | A | L | V | K | E | L | A | T | A | K | F | D | E | T | V | E | V | H | F | R | L | G | I | D | P | R | K | S | D | Q | N | V | R | G | T | V | A | L | P | H | G | T | G | R | S | V | R | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | T | T | T | T | S | ![]() | ![]() | ![]() | ![]() | T | T | S | T | T | T | S | S | S | S | S | ![]() | ![]() | S | T | T | S | T | T | S | S | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | A | V | I | T | K | G | E | N | V | Q | A | A | E | A | A | G | A | D | V | V | G | S | D | E | L | I | E | R | I | A | G | G | F | M | D | F | D | A | V | V | A | T | P | D | M | M | A | Q | I | G | Q | K | L | A | R | L | L | G | P | R | G | L | L | P | N | P | K | S | G | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | T | T | S | T | T | S | S | S | S | B | S | S | G | G | G | S | S | S | S | S | S | S | S | G | G | G | G | G | G | G | T | S | S | S | S | S | S | S | G | G | G | S | T | T | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | V | G | A | D | V | A | G | M | V | R | G | L | K | A | G | R | I | E | F | R | N | D | K | T | G | V | V | H | A | P | I | G | K | A | S | F | E | S | G | N | L | S | A | N | Y | Q | A | L | I | S | A | L | E | G | A | K | P | G | T | A | K | G | V | F | L | R | S | A | Y | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | T | S | S | T | T | T | T | S | S | S | S | S | ![]() | ![]() | S | S | S | T | T | T | T | T | T | S | T | T | S | S | S | S | S | S | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |||||||||||||||
Sequence | T | T | T | M | G | P | S | I | P | L | A | L | G | G | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S |
Download: | PDB structure | FASTA sequence |
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