PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5dldA_

Fold library id	PDB Header	Molecule	Title
c5dldA_	PDB header: isomerase	Chain: A: PDB Molecule: udp-n-acetylglucosamine 2-epimerase;	PDBTitle: crystal structure of a udp-n-acetylglucosamine 2-epimerase from2 burkholderia vietnamiensis complexed with udp-glcnac and udp

Links to external resources
Added to library: Sat Oct 3 08:49:15 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H M K K I L L V F G T R P E A I K M A P L V R A L K A R A D V D A K V C V T A Q H R Q M L D Q V L S L F D I E P D Y D L D L M R Q G Q T L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S S S T T
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D V T T G I L H A I G A V F D D L R P D I V L V H G D T T T T L A V S L A A F Y R Y L P I G H V E A G L R S G D I W S P W P E E L N R R V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S T T T
S
S
T T S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D A V S S W H F A P T G Q A R D N L L S E G V P V G S V V M T G N T V I D A L H D V K H M L E R D D A L S R E V A A R F P F L D P T A R M V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S T T
G G G
T T
T T
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L I T G H R R E S F G E P F R N F C E A L R T L A H R Y R D A Q F V Y P L H L N P N V R E P A L A L L G G E A N I Y L I E P Q E Y L A F V Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T
T T S
S
T T
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence L M S R S H F I I T D S G G I Q E E G P A L G K P V L V T R D T T E R P E A I R A G T A R L V G T D P E L I V R E A S R L F D S A S A Y D E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S S
S
T S
T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . .

Sequence M A R A S N P Y G D G H A S E R I V H A L M H A E L P L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	M	K	K	I	L	L	V	F	G	T	R	P	E	A	I	K	M	A	P	L	V	R	A	L	K	A	R	A	D	V	D	A	K	V	C	V	T	A	Q	H	R	Q	M	L	D	Q	V	L	S	L	F	D	I	E	P	D	Y	D	L	D	L	M	R	Q	G	Q	T	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S																		S	S										S	S	S										T	T				S								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	V	T	T	G	I	L	H	A	I	G	A	V	F	D	D	L	R	P	D	I	V	L	V	H	G	D	T	T	T	T	L	A	V	S	L	A	A	F	Y	R	Y	L	P	I	G	H	V	E	A	G	L	R	S	G	D	I	W	S	P	W	P	E	E	L	N	R	R	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S						T	T	S												T	T	T							S						S		T	T	S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	A	V	S	S	W	H	F	A	P	T	G	Q	A	R	D	N	L	L	S	E	G	V	P	V	G	S	V	V	M	T	G	N	T	V	I	D	A	L	H	D	V	K	H	M	L	E	R	D	D	A	L	S	R	E	V	A	A	R	F	P	F	L	D	P	T	A	R	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S					S	S										T	T			G	G	G																															T	T		T	T			T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	I	T	G	H	R	R	E	S	F	G	E	P	F	R	N	F	C	E	A	L	R	T	L	A	H	R	Y	R	D	A	Q	F	V	Y	P	L	H	L	N	P	N	V	R	E	P	A	L	A	L	L	G	G	E	A	N	I	Y	L	I	E	P	Q	E	Y	L	A	F	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G	T	T																		T	T	S								S													T	T		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	M	S	R	S	H	F	I	I	T	D	S	G	G	I	Q	E	E	G	P	A	L	G	K	P	V	L	V	T	R	D	T	T	E	R	P	E	A	I	R	A	G	T	A	R	L	V	G	T	D	P	E	L	I	V	R	E	A	S	R	L	F	D	S	A	S	A	Y	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S																T	T							S	S			S								T	S					T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Sequence	M	A	R	A	S	N	P	Y	G	D	G	H	A	S	E	R	I	V	H	A	L	M	H	A	E	L	P	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		S	S