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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5dl5A_

Fold library idPDB HeaderMoleculeTitle
c5dl5A_2.05PDB header: membrane proteinChain: A: PDB Molecule: membrane protein;


Added to library: Sat Feb 6 08:23:17 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ESEQSEAKGFVEDANGSILFRTGYLTRDKKQGAKDTSSVAQSAIVSIESGFTPGIVGFGVGVVGDGSFKI
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Known secondary structure (DSSP)

TTTT


TTTT

TTS





SSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GENKNAGNQMIPKHNDGSAYDHWARGGGSVKARFSNTTVRYGTQVLDLPVLASNTGRMVPEYFTGTLLTS
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Known secondary structure (DSSP) S

TT

TTSS
B
TTS
B
STT

TT


SSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence HEIKNLEVVAGKFTKDQMSDQINTDADASGRGLDRAIVWGAKYKFNDNLNASYYGLDSKNALERHYANVN
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Known secondary structure (DSSP) TT
TT

SSSB
TTS




TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FKQPLANDSSLTYDFSGYHTKFDANAHTYSATGTVAPNYAADGIAGEEKTNNIWAISGTYATGPHSVMLA
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Known secondary structure (DSSP) TTT
TTSB
SS

SS

TT
B
SS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YQQNTGNVGYDYGQNADGFQSIYLPNSYMSDFIGNHEKSAQIQYNVDFGKLGVLPGLNWTTAFVYGWDIK
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Known secondary structure (DSSP) SS


TTSSSS
TT


SSS
SSS


STT
TTTTTS
TT
 .........360.........370.........380.........390.........400.........410......
Sequence VRNVTDDAQEREFFNQVKYTVQSGFAKDASLRIRNSYYRASDAYQGAYIGDTNEWRIFLDIPVKLF
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Known secondary structure (DSSP) TTT

SSTTTT

TTSSTTS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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