Fold library entry viewer: c5dkyA_

Added to library: Sat Jan 30 08:49:47 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	F	V	K	E	H	D	W	K	K	C	D	Q	S	G	F	C	R	R	N	R	A	Y	A	D	H	A	L	S	A	I	S	W	E	S	P	Y	K	I	A	P	E	T	G	S	F	K	D	G	Q	Y	Q	A	I	I	L	K	T	I	N	D	H	G	E	T	V	R	L	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S						G	G	G	S																S	T	T				S					G	G	G					T	T											S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	V	S	F	L	E	S	G	T	A	R	V	T	I	D	E	E	K	R	Q	K	G	E	I	E	L	R	H	D	S	K	A	R	K	E	R	Y	N	E	A	E	Q	W	V	I	V	G	G	M	T	L	D	K	G	A	K	V	D	Y	E	D	K	T	Q	M	T	V	K	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	T	T	S													T	T					G	G	G					S	S												S				B		T	T								S	S							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	S	S	K	F	E	A	T	I	K	F	A	P	F	S	I	D	F	K	R	D	G	A	S	H	I	K	F	N	D	Q	G	L	L	N	I	E	H	W	R	P	K	I	D	P	P	D	D	S	T	W	W	E	E	S	F	G	G	N	T	D	S	K	P	R	G	P	E	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G									T	T								T	T							S	T	T																		T	T	S	S					T	T						T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	L	D	I	S	F	V	G	Y	E	H	V	F	G	I	P	S	H	A	S	P	L	S	L	K	Q	T	R	G	G	E	G	N	Y	N	E	P	Y	R	M	Y	N	A	D	V	F	E	Y	I	L	D	S	P	M	T	L	Y	G	S	I	P	F	M	Q	A	H	R	K	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T											S	S		S	B				S	S			T	T			S	S										T	T			S	S						S											T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	V	G	I	F	W	L	N	A	A	E	T	W	V	D	I	T	K	G	K	D	S	K	N	P	L	A	L	G	V	K	S	K	I	T	T	R	T	H	W	F	S	E	S	G	L	L	D	V	F	V	F	L	G	P	T	P	K	D	I	I	S	K	Y	A	E	L	T	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S											S	S	S	S	T	T		S	S	S													S	S	S										S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	A	M	P	Q	E	F	S	L	G	Y	H	Q	C	R	W	N	Y	V	S	D	E	D	V	K	D	V	D	R	K	M	D	K	F	N	M	P	Y	D	V	I	W	L	D	I	E	Y	T	D	E	K	K	Y	F	T	W	D	K	H	S	F	K	D	P	I	G	M	G	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	G	S						T	T			S														T	T				S						G	G	G	S	B	T	T	B	T	T				T	T	T		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	E	A	H	G	R	K	L	V	T	I	I	D	P	H	I	K	N	T	N	N	Y	P	V	V	D	E	L	K	S	K	D	L	A	V	K	T	K	D	G	S	I	F	E	G	W	C	W	P	G	S	S	H	W	I	D	A	F	N	P	A	A	R	E	W	W	K	G	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T									S						S	S										T	T		B		B		T	T	S	S	B						T	T						B		T	T	S											T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	Y	D	K	F	K	G	T	M	E	N	T	F	I	W	N	D	M	N	E	P	S	V	F	N	G	P	E	V	T	M	P	K	D	N	L	H	H	G	N	W	E	H	R	D	V	H	N	L	N	G	M	T	F	Q	N	A	T	Y	H	A	L	L	S	R	K	P	G	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	T	S	T	T			T	T							S	T	T	T			T	T	S	G	G	G	S			T	T				T	T	T							G	G	G														S		S	S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	R	P	F	V	L	T	R	A	F	F	A	G	S	Q	R	L	G	A	M	W	T	G	D	N	T	A	D	W	G	Y	L	K	A	S	I	P	M	V	L	S	Q	G	I	A	G	F	P	F	A	G	A	D	V	G	G	F	F	G	N	P	D	K	D	L	L	T	R	W	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S			T	T	G	G	G	T							S		B	S	S																	T	T								B	T		S	B	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	T	G	I	F	Y	P	F	F	R	A	H	A	H	I	D	A	R	R	R	E	P	Y	L	T	G	E	P	Y	N	T	I	I	A	A	A	L	R	L	R	Y	S	L	L	P	S	W	Y	T	A	F	R	H	A	H	L	D	G	T	P	I	I	K	P	M	F	Y	T	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	S	S							T	T	S					G	G	G	S		T	T															T																		S									T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	E	E	A	G	L	P	I	D	D	Q	F	F	I	G	N	T	G	L	L	A	K	P	V	T	D	K	D	R	T	S	V	D	I	W	I	P	D	S	E	V	Y	Y	D	Y	F	T	Y	D	I	I	S	A	A	K	S	K	T	A	T	L	D	A	P	L	E	K	I	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		G	G	G	T	T			S					T	T	T	T								S	T	T										S	S	S					T	T	T		B					S	S										T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	M	R	G	G	H	V	F	A	R	R	D	I	P	R	R	S	S	A	L	M	K	W	D	P	Y	T	L	V	V	V	L	G	N	D	R	K	A	E	G	D	L	Y	V	D	D	G	D	S	F	D	Y	E	K	G	Q	Y	I	H	R	R	F	I	F	D	A	N	T	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T								S			S	S	S	G	G	G	T	T											T	T												S	S	S	S	G	G	G	G	T											T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	S	A	D	Y	E	G	R	D	D	A	S	I	K	E	G	E	W	L	K	K	M	R	T	V	N	V	E	K	I	I	V	V	G	A	P	A	A	W	K	G	K	K	T	V	T	V	E	S	E	G	K	T	W	A	A	A	I	E	Y	N	P	A	E	K	S	R	A	A	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T				G	G	G	S										T	T										S			G	G	G	T	T									T	T													B	T	T	B
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.
Sequence	V	V	K	K	V	G	V	R	V	G	A	D	F	K	I	V	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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