PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5dgxA_

Fold library id	PDB Header	Molecule	Title
c5dgxA_	PDB header: transport protein	Chain: A: PDB Molecule: lipid a export atp-binding/permease protein msba;	PDBTitle: 1.73 angstrom resolution crystal structure of the abc-atpase domain2 (residues 357-609) of lipid a transport protein (msba) from3 francisella tularensis subsp. tularensis schu s4 in complex with adp

Links to external resources
Added to library: Sat Sep 19 09:40:53 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K E T G S K E L A K V D G N V T I K D L S F A F G E H K V L S G V S V D I K A G Q T V A F V G K S G S G K T T L T S I I S R F Y T Q H E G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
S
T T
T T
S T T S S T T S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I L L D G V D T R E L T L E N L R S H L S I V S Q N V H L F D D T V Y N N I A F G E V S E E E V I D A L K R A N A Y E F V Q E L S D G I N T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T G G G B
T S S
S S B
T T
T S T T G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N I G N N G S K L S G G Q R Q R I S I A R A L L K N A P V L I F D E L E S L T K S C T T I V I A H R L S T V E N A D K I V V M D G G R V V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
G G G T T S
S
T S
S
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence S G K H Q E L L E Q G G L Y T R L Y Q S G L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	E	T	G	S	K	E	L	A	K	V	D	G	N	V	T	I	K	D	L	S	F	A	F	G	E	H	K	V	L	S	G	V	S	V	D	I	K	A	G	Q	T	V	A	F	V	G	K	S	G	S	G	K	T	T	L	T	S	I	I	S	R	F	Y	T	Q	H	E	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			B			S																T	T													T	T								S	T	T	S	S									T	T	S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	L	L	D	G	V	D	T	R	E	L	T	L	E	N	L	R	S	H	L	S	I	V	S	Q	N	V	H	L	F	D	D	T	V	Y	N	N	I	A	F	G	E	V	S	E	E	E	V	I	D	A	L	K	R	A	N	A	Y	E	F	V	Q	E	L	S	D	G	I	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			G	G	G	B								T					S	S						S	S	B																						T	T							T	S	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	I	G	N	N	G	S	K	L	S	G	G	Q	R	Q	R	I	S	I	A	R	A	L	L	K	N	A	P	V	L	I	F	D	E	L	E	S	L	T	K	S	C	T	T	I	V	I	A	H	R	L	S	T	V	E	N	A	D	K	I	V	V	M	D	G	G	R	V	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B			G	G	G	T	T	S																			S													T	S								S								S							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	S	G	K	H	Q	E	L	L	E	Q	G	G	L	Y	T	R	L	Y	Q	S	G	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S								T	T