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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5dg3D_ | PDB header: transferase | Chain: D: PDB Molecule: acyl-[acyl-carrier-protein]--udp-n-acetylglucosamine o- | PDBTitle: structure of pseudomonas aeruginosa lpxa in complex with udp-3-o-(r-3-2 hydroxydecanoyl)-glcnac |
Added to library: Sat Sep 19 08:27:15 2015 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | L | I | D | P | R | A | I | I | D | P | S | A | R | L | A | A | D | V | Q | V | G | P | W | S | I | V | G | A | E | V | E | I | G | E | G | T | V | I | G | P | H | V | V | L | K | G | P | T | K | I | G | K | H | N | R | I | Y | Q | F | S | S | V | G | E | D | T | P | P | T | R |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | S | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | L | V | I | G | D | H | N | V | I | R | E | G | V | T | I | H | R | G | T | V | Q | D | R | A | E | T | T | I | G | D | H | N | L | I | M | A | Y | A | H | I | G | H | D | S | V | I | G | N | H | C | I | L | V | N | N | T | A | L | A | G | H | V | H | V | D | D | W | A | I | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | T | T | T | T | S | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | S | S | ![]() | ![]() | T | T | ![]() | ![]() | S | S | ![]() | ![]() | T | T | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | S | G | Y | T | L | V | H | Q | Y | C | R | I | G | A | H | S | F | S | G | M | G | S | A | I | G | K | D | V | P | A | Y | V | T | V | F | G | N | P | A | E | A | R | S | M | N | F | E | G | M | R | R | R | G | F | S | S | E | A | I | H | A | L | R | R | A | Y | K | V | V | Y |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | T | T | ![]() | ![]() | S | B | B | T | T | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
Sequence | R | Q | G | H | T | V | E | E | A | L | A | E | L | A | E | S | A | A | Q | F | P | E | V | A | V | F | R | D | S | I | Q | S | A | T | R | G | I | T | R | |||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | B |
Download: | PDB structure | FASTA sequence |
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