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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5dfzD_

Fold library idPDB HeaderMoleculeTitle
c5dfzD_PDB header: transferaseChain: D: PDB Molecule: vacuolar protein sorting-associated protein 30;PDBTitle: structure of vps34 complex ii from s. cerevisiae.


Added to library: Sat Oct 10 08:48:34 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSTQVNAMTNVFNILSSQTNDCCNILINRLKSEYDDAIKERDTYAQFLSKLESQNKEISESNKEKQYSHN
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Known secondary structure (DSSP)
TTSS






S
GGGTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSEKENLKKEEERLLDQLLRLEMTDDDLDGELVRLQEKKVQLENEKLQKLSDQNLMDLNNIQFNKNLQSL
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Known secondary structure (DSSP)
 .........150.........160.........170.........180.........190.........200.........210
Sequence KLQYELSLNQLDKLRKINIFNATFKISHSGPFATINGLRLGSIPESVVPWKEINAALGQLILLLATINKN
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Known secondary structure (DSSP) TTTT
SS
TTTT



SSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence LKINLVDYELQPMGSFSKIKKRMVNSVEYNNSTTNAPGDWLILPVYYDEETKFDKSLETTLEIISEITRQ
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Known secondary structure (DSSP) S



SSTT







TT



S



S

B






 .........290.........300.........310.........320.........330.........340.
Sequence LSTIASSYSELPYIMNKDKINGLSVKLHGSSPNLEWTTAMKFLLTNVKWLLAFSSNLLSKS
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Known secondary structure (DSSP)





B
SSTT


TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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