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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5daqA_

Fold library idPDB HeaderMoleculeTitle
c5daqA_PDB header: oxidoreductaseChain: A: PDB Molecule: phytanoyl-coa dioxygenase family protein (afu_orthologuePDBTitle: fe(ii)/(alpha)ketoglutarate-dependent dioxygenase asqj in complex with2 4-methoxycyclopeptin


Added to library: Sat Nov 28 08:23:08 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KSQIPRLSAINDLHKIWPTVEEHGAAIIESFLSLDIVRRLNEEVDPFVKIEPIPAAKTKDHPNHVLSTTT
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Known secondary structure (DSSP)




TTT
STSS



TT
TT
SS

SSS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLVNVLAPISKAYREDVLNSKVLHRICSDAFHVYGDYWVLMGAVMELAPSNPAQPLHRDMRFSHPIVEYL
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Known secondary structure (DSSP)


TTT
TTTT
TTTB

TT





B
TTTTT
GGGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KPDAPATSINFLVALSPFTAENGATHVILGSHKWQNLSNVSMDATVRALMNPGDALLITDSTIHCGGAET
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Known secondary structure (DSSP)
TTS

SSS
B
TTTT


TTGGG
S

SS

GGG


B
TT
TT






 .........220.........230.........240.........250.........260.........270.........280
Sequence TGTETRRLLTITMGISQLTPLESNLAVPRPVIESLTPLAQRLLGWASQRSAAPRDIGLLTIRGNSIEKTM
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Known secondary structure (DSSP) SSS

TTS

SS

TTS
TS
TTSS
B
BSSTT


BS
BTTB
T
 ........
Sequence NLKAEQPL
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Known secondary structure (DSSP) T


S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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