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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5da8N_

Fold library idPDB HeaderMoleculeTitle
c5da8N_PDB header: chaperoneChain: N: PDB Molecule: 60 kda chaperonin;PDBTitle: crystal structure of chaperonin groel from


Added to library: Sat Oct 17 08:26:44 2015
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence TAKDILFDAEARTKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELVDPVENMGA
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Known secondary structure (DSSP)

TT
STT




SSSS


T


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVTAGARPIDLKRGIDRAVKEVVAELRNISRSISGK
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Known secondary structure (DSSP) SSS
TT


B


 .........150.........160.........170.........180.........190.........200.........210
Sequence KEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMETELKVVEGMQFDRGYLSPYFVTNSETM
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Known secondary structure (DSSP) TTTS

TTS
SSS




S


SSGGG
SBTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EAELDEALILIHDKKISNMKELLPILEKAAQRPLLIIAEDEALATLVVNKLGTLKVAAVKAPGFGDRRKA
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Known secondary structure (DSSP) B
SS

TT
TTTT







TT






S
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MLEDIAILTGGTVIYKLENATMAYLGQAARITIDKDNTTIVEGKGKQEEIKARINEIKGQIEKSYDTEKL
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Known secondary structure (DSSP) T





SS


TTSS
SS



TTS



S
ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence QERLAKLSGGVAVLKIGASTEVEMKEKKARVEDALHATRAAVQEGIVVGGGVALIRAAKGLAKAVADNED
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Known secondary structure (DSSP)


SSS
TTTGGGGGGG


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence QKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEKVKNAEGDYGFNARTEQYENLIEAGVVDPTKVTRSAL
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Known secondary structure (DSSP) TTTTT
S

S
TTTTTTT
 .........500.........510.
Sequence ENAASVASILLTTEAAITDVK
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Known secondary structure (DSSP) T




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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