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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5d9qD_

Fold library idPDB HeaderMoleculeTitle
c5d9qD_4.40PDB header: immune systemChain: D: PDB Molecule: nih45-46 single chain fv;


Added to library: Thu Feb 9 18:13:29 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VRLSQSGGQMKKPGESMRLSCRASGYEFLNCPINWIRLAPGRRPEWMGWLKPRGGAVNYARKFQGRVTMT
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Known secondary structure (DSSP)
B
S
BBB
B
BBT


B
BBB

BSB

BBTTTT
TTTTTB
 .........80.........90.........100.........110.........120.........130.........140
Sequence RDVYSDTAFLELRSLTSDDTAVYFCTRGKYCTARDYYNWDFEHWGRGAPVTVSVLTQSPATLSLSPGETA
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Known secondary structure (DSSP) TTTS

TBBBTTBS
B
B
--
BSB
BTTTTB
B





BTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence IISCRTSQSGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGADYNLSISNLESGDFGVYYCQQY
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Known secondary structure (DSSP) SS

TTGGG
TT

TTB
BT
TT
STT
TB
 .........220.
Sequence EFFGQGTKVQV
Predicted secondary structure




SS confidence










Known secondary structure (DSSP) TB
B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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