PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5d92B_

Fold library id	PDB Header	Molecule	Title
c5d92B_	PDB header: membrane protein	Chain: B: PDB Molecule: af2299 protein,phosphatidylinositol synthase;	PDBTitle: structure of a phosphatidylinositolphosphate (pip) synthase from2 renibacterium salmoninarum

Links to external resources
Added to library: Sat Nov 7 08:22:55 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M R L A Y V K N H E I Y G E K L L G L T L R E R I E K T L Q R A G F D V R F F D E L S L E E A E D Y L I I L E P V L I L E R D L L L E G R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G S T T T T
S S
S
S
S
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I L V S D G F T V G Y F F G G D F R T V F D G N L Q S S I E K Y L S L N N L E S Y E I W A I K L S N D N L K T A E K L L L S S L I G S G S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G G G T
S
S
S T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N K Y A R G L F A A I F L P I A R L L A D W G V S P D A V T V V G T L G V M A G A L I F Y P M G Q L F W G T V V I T V F V F S D I I D G L M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A R L L F R E G P W G A F L D S Y L D R V G D S S V F T G I V I W F F L G G A N P T I A I L A L I C L V L S S L V S Y S K A R A E G L G L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . .

Sequence A N V G I A E R S E R L V V V L V A T G L V G L G I P S W V L L V V L I V L A I A S V V T I F Q R V L T V R E Q A K A W T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	L	A	Y	V	K	N	H	E	I	Y	G	E	K	L	L	G	L	T	L	R	E	R	I	E	K	T	L	Q	R	A	G	F	D	V	R	F	F	D	E	L	S	L	E	E	A	E	D	Y	L	I	I	L	E	P	V	L	I	L	E	R	D	L	L	L	E	G	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	G	G	G	S			T	T														T	T							S	S					S		S							S							S	S					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	L	V	S	D	G	F	T	V	G	Y	F	F	G	G	D	F	R	T	V	F	D	G	N	L	Q	S	S	I	E	K	Y	L	S	L	N	N	L	E	S	Y	E	I	W	A	I	K	L	S	N	D	N	L	K	T	A	E	K	L	L	L	S	S	L	I	G	S	G	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T									G	G	G	G	G	T			S													S														S	T	T																S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	K	Y	A	R	G	L	F	A	A	I	F	L	P	I	A	R	L	L	A	D	W	G	V	S	P	D	A	V	T	V	V	G	T	L	G	V	M	A	G	A	L	I	F	Y	P	M	G	Q	L	F	W	G	T	V	V	I	T	V	F	V	F	S	D	I	I	D	G	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T																				T					T														T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	R	L	L	F	R	E	G	P	W	G	A	F	L	D	S	Y	L	D	R	V	G	D	S	S	V	F	T	G	I	V	I	W	F	F	L	G	G	A	N	P	T	I	A	I	L	A	L	I	C	L	V	L	S	S	L	V	S	Y	S	K	A	R	A	E	G	L	G	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																																T	T	S																													T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Sequence	A	N	V	G	I	A	E	R	S	E	R	L	V	V	V	L	V	A	T	G	L	V	G	L	G	I	P	S	W	V	L	L	V	V	L	I	V	L	A	I	A	S	V	V	T	I	F	Q	R	V	L	T	V	R	E	Q	A	K	A	W	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																			T	T			T