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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5d88A_

Fold library idPDB HeaderMoleculeTitle
c5d88A_PDB header: hydrolaseChain: A: PDB Molecule: predicted protease of the collagenase family;PDBTitle: the structure of the u32 peptidase mk0906


Added to library: Sat Dec 5 08:19:45 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSWSHPQFEKSGSMTRRWYLCCSRHHLDTVPEDSDGIVVPVTEHGVATLLPRYPETYEVEDIVDVAKDRG
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Known secondary structure (DSSP)
BTTB







S


STTS
TT


GGG


S

S



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSVQALMDFTCAGCEHLSPDGYPSLRSTLDYLASDLEVDGVVVADPYLVEVLATEYDLTVVVSHTAAVDT
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Known secondary structure (DSSP)



S

TTGGGSTTTT

S



S
GGG


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PEKAWHFERLGADVITVDPALNSNEEEVSAIRERVSVELRTAVGAITFRDPVAFFERNLFSHATAEGIEV
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Known secondary structure (DSSP) T
S

GGGTT


ST
TTSTTT


 .........220.........230.........240.......
Sequence DPYRNNPYEPMRERVVVWEVREELFDEVFILASGEPP
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Known secondary structure (DSSP)
TTTT
TTGGG







GGG
SS

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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