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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5d79B_

Fold library idPDB HeaderMoleculeTitle
c5d79B_1.85PDB header: oxidoreductaseChain: B: PDB Molecule: berberine bridge enzyme-like protein;


Added to library: Sat Jun 25 08:38:12 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HEDFLKCVIHTSKDSSFFSILDSSIQNPRFSVSETPKPVSIITPVKASDVQTVIRCAQLHGIHVRTRSAG
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Known secondary structure (DSSP)


TTSTTT
SSGGGSSTTS


S

SSTTT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence HCYEGLSYIAYNKPFAVIDLRNLRSISLDVDNRTGWVQTGATAGELYYEIGKTTKSLAFPAGIHPTVGVG
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Known secondary structure (DSSP)

TT
TTT

SSS

TT


TTTTTTSB
TT



S
TTSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence GQFSGGGYGTLLRKYGLAADNIIDALVVDASGRILDRQAMGEDYFWAIRGGGGSSFGVILSWKVKLVDVP
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Known secondary structure (DSSP) T



TT

GGGG
SS



TTTS
GGGT



 .........220.........230.........240.........250.........260.........270.........280
Sequence STITVFKVQKTSKKEAVRIIKKWQYAADKVPDDLFIRTTLERSNKNAVHALFTGLYIGPVNNLLALMEEK
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Known secondary structure (DSSP) S


TTTS
TT
TTS
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FPELGLEKEGCEEMSWIESVLWFADFPKGESLGVLTNRERTSLSFKGKDDFVQEPIPEAAIQEIWRRLEA
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Known secondary structure (DSSP)
GGG


GGG
TT

TT

GGGGG




SSS


TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence PEARLGKIILTPFGGKMSEMAEYETPFPHRGGNLYEIQYVAYWREEEDKNKTETDKYLKWVDSVYEFMTP
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Known secondary structure (DSSP) GGGTT

TS
TTSSS



TT

GGGGGSTTTSTGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence YVSKSPRGAYVNFKDMDLGMYLGKKKTKYEEGKSWGVKYFKNNFERLVRVKTRVDPTDFFCDEQSIPLVN
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Known secondary structure (DSSP) GS

SS



TTS

GGG



S
SSSGGG
TT

S

TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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