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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5d78A_

Fold library idPDB HeaderMoleculeTitle
c5d78A_1.25PDB header: rna binding proteinChain: A: PDB Molecule: rna-binding protein mip6;


Added to library: Thu Feb 9 22:58:33 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence GPLGSMKTILVKNLPSDTTQEEVLDYFSTIGPIKSVFISEKQANTPHKAFVTYKNEEESKKAQKLNKTIF
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Known secondary structure (DSSP)


GGGG


TT

TTTS




TTS

SS

TT
 .........80
Sequence KNHTIWVGPG
Predicted secondary structure



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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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