Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5d6aA_

Fold library idPDB HeaderMoleculeTitle
c5d6aA_PDB header: hydrolaseChain: A: PDB Molecule: predicted atpase of the abc class;PDBTitle: 2.7 angstrom crystal structure of abc transporter atpase from vibrio2 vulnificus in complex with adenylyl-imidodiphosphate (amp-pnp)


Added to library: Sat Aug 29 08:22:39 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNAXDQLIAKLKKLEKQNYRAYQQIKGQYNFTDFDLFIDHIQSDPYASASRFRAFRAWSLTGLSWLKEES
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)
TTTTSBGGGGGGG

SS


SSTTSS
GGGTT
GGGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AAFQLGARDFIARSFAEFAKQENAIAISLHGQTVLDSTSVLFTEEGIELRFRVNLPAEGRDILAKKAINI
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TTT
TT



TT

BSS
SS


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ITFHLPKFIRRSTIERELDKEALLTHCQVVEDQEALREQLEVNGLVSFVANGSILPRVAGNCDLPXKDAV
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TTT
GGGS
TTTTTTTT



TT
SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence EFTAPESLQVTLHAPNRGYVTGLGIPKGITLIVGGGFHGKSTLLNAIERSIYNHIPGDGREYIVTDGSAX
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)




GGGTTTSS
STTSSTTS
TTSS
TT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KIRAEEGRCVHHLNLSNYINHLPXGKDTADFTTQDASGSTSQAAWLQESVEAGASTLLIDEDTSATNFXI
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)



SS



TTT



STT

TTSSS

TT
SGGGS

 .........360.........370.........380.........390.........400.........410.........420
Sequence RDERXQALVAKGDEPITPLVDRIGQLRDELEISTIIVXGGSGDYLDVADNVIQXHDYQALDVTEKAKEVI
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)

S
SS








SS

GGGTT
SSSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence QLHPTEAPLVTFPPRALHCSALXNILTDGKFRVSAKGKDSLRFGKEFTDLSALEQLESSDEVNAIGWVWY
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) S











TTTTT
TTTTT
TT
TT


 .........500.........510.........520.........530.........540........
Sequence QLAQHAGWNSNPAKQISELLGDAWFQNXPQHGDLAKPRPIDVXAALNRXRKSQFRNNH
Predicted secondary structure



























SS confidence

























































Known secondary structure (DSSP) TTSSSS
TSS
TTTTS


SS
B


T
TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D