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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5d5dA_

Fold library idPDB HeaderMoleculeTitle
c5d5dA_2.40PDB header: transport proteinChain: A: PDB Molecule: alginate production protein alge;


Added to library: Sat Jan 16 08:27:28 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KNFGLDVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFGQWGDWSAYFMGQAVAATDKSYLAAREFWVD
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Known secondary structure (DSSP)


TTTTSSS


TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence YAGLTAYPGEHLRFGRQRLREDSGQWQDTNIEALNWSFETTLLNAHAGVAQRFSEYRTKDRTHVFGDIST
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Known secondary structure (DSSP)
TTSS
TT

TTSSSB
SS

S


B



 .........150.........160.........170.........180.........190.........200.........210
Sequence QWAPHHRIGVRIHHADDSGHLRRPGEEVDNLDKTYTGQLTWLGIEATGDAYNYRSSMPLNYWASATWLTG
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Known secondary structure (DSSP) TT





TTSB

TTS
SBTT
SS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DRDNLTTTTVDDRRIATGKQSGDVNAFGVDLGLRWNIDEQWKAGVGYARGSGGGKDGEEQFQQTGLESNR
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Known secondary structure (DSSP) TT
SSS



TT
TT




SB


 .........290.........300.........310.........320.........330.........340.........350
Sequence SNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLREDYDASLVYHKFWRVDDDSDIGTSGINAALQPGE
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Known secondary structure (DSSP)
TTSSSS
TT
TTT
B
SSSTTT
SSTTS


BSS





TT
 .........360.........370.........380.........390.........400...
Sequence KDIGQELDLVVTKYFKQSALIRFRGGLFKPGDAYGPGTDSTMHRAFVDFIWRF
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Known secondary structure (DSSP)




GGG
SSS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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