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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5d4yA_

Fold library idPDB HeaderMoleculeTitle
c5d4yA_2.50PDB header: hydrolaseChain: A: PDB Molecule: xylanase;


Added to library: Sat Feb 27 08:19:22 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QGLKDAYKDYFKIGVAVNNRNVADPDQIKVVLREFNSITAENAMKPQPTEPKKGEFNWEDADKIADFCRA
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Known secondary structure (DSSP)

TTTT

GGGGT

SSSTTS
SSTT



 .........80.........90.........100.........110.........120.........130.........140
Sequence NGIKMRGHTLMWHSQIGSWMYQGNLLSKEEFYANMKHHIQAIVNRYKDVVYCWDVVNEAVADSPVYPGRP
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Known secondary structure (DSSP) T



SS
SSS

GGGT





TTTS
B

S


TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ELRNSPMYQIAGEEFIYKAFEYAHEADPDALLFYNDYNDAEPAKSQRIYNLVKRMKDAGVPIDGIGMQAH
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Known secondary structure (DSSP)
B


TT
TTSSSTTST





 .........220.........230.........240.........250.........260.........270.........280
Sequence YNVYGPTMKEVDDAIKLYSTVVDHIHLTELDIRINEVSDWERTLQQDQYVQLFKVLRKHKDVIDCVTFWN
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Known secondary structure (DSSP) SSSS
TT
SS



TTTTSS
 .........290.........300.........310....
Sequence VSDKDSWLGVRNYPLLFDENYKPKQAYNAVKNFD
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Known secondary structure (DSSP) SSTTT
TT
GGG

SSB
TTS
B
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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