Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5d3mA_

Fold library idPDB HeaderMoleculeTitle
c5d3mA_3.30PDB header: transport proteinChain: A: PDB Molecule: energy-coupling factor transporter atp-binding protein


Added to library: Sat Apr 9 12:01:48 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSDNIISFDHVTFTYPDSPRPALSDLSFAIERGSWTALIGHNGSGKSTVSKLINGLLAPDDLDKSSITVD
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

S



TTSS
SS




S

TT


STTSSTSS

S
SSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVKLGADTVWEVREKVGIVFQNPDNQFVGATVSDDVAFGLENRAVPRPEMLKIVAQAVADVGMADYADSE
Predicted secondary structure


























































SS confidence





































































Known secondary structure (DSSP) S


SSTTTTTS


SSSSSSTT

TT
GGGTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence PSNLSGGQKQRVAIAGILAVKPQVIILDESTSMLDPEGKEQILDLVRKIKEDNNLTVISITHDLEEAAGA
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) GGGS
TT

SSTTSSS
T

S
STTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DQVLVLDDGQLLDQGKPEEIFPKVEMLKRIGLDIPFVYRLKQLLKERGIVLPDEIDDDEKLVQSLWQLNS
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) STT
GGGTT



TTT







SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D