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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5d0qC_

Fold library idPDB HeaderMoleculeTitle
c5d0qC_3.50PDB header: protein transportChain: C: PDB Molecule: outer membrane protein assembly factor bamc;


Added to library: Sat Mar 12 08:35:44 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CSSDSRYKRQVSGDEAYLEAAPLAELHAPAGXILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSG
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STTS
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STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ARTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQIS
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Known secondary structure (DSSP) TT

S
STTT



TTTT




TT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VKPQGYQQAVTVKLLNLEQAGKPVADAASXQRYSTEXXNVISAGLDKSATDAANAAQNRADVQSAADDTG
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Known secondary structure (DSSP) SSSSTT






TTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LPXLVVRGPFNVVWQRLPAALEKVGXKVTDSTRSQGNXAVTYKPLSDSDWQELGASDPGLASGDYKLQVG
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Known secondary structure (DSSP)

S
TTTTT



TTTT







 .........290.........300.........310......
Sequence DLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK
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Known secondary structure (DSSP)
SS
SSS
B

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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