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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cykB_

Fold library idPDB HeaderMoleculeTitle
c5cykB_PDB header: protein bindingChain: B: PDB Molecule: ribosome biogenesis protein erb1;PDBTitle: structure of ytm1 bound to the c-terminal domain of erb1-r486e


Added to library: Sat Oct 31 09:05:52 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PDELKPFPTVQQTIFRGHEGRVRSVAIDPTGVALATGGDDGTVRVWELLTGEQVWSVKLNGDEAVNTVRW
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Known secondary structure (DSSP)
GGG




S


SS

TTSSTTSTTT


SSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence RPTKDTFILAAAAGEDIFLMIPTHPSVTPALDQASRDILNAGFPPGKWARPGTRLEDEGVLLRITVRSTI
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Known secondary structure (DSSP)
S
TTT

TT



TT

TT





TTSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence KAISWHRRGDHFATVSPSGQRSSVAIHTLSKHLTQIPFRKLNGLAQTASFHPLRPLFFVATQRSIRCYDL
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Known secondary structure (DSSP)

TTSS
SS
STTSTTTT

S


SS

SSSSSS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence QKLELVKIVQPGAKWISSFDVHPGGDNLVVGSYDKRLLWHDLDLSNRPYKTMRFHTEAIRAVRFHKGGLP
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Known secondary structure (DSSP) TT




SSS
TTSSSSSTTT
SS
S

SS


SS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LFADASDDGSLQIFHGKVPNDQLENPTIVPVKMLKGHKVVNKLGVLDIDWHPREPWCVSAGADGTARLWM
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Known secondary structure (DSSP) SSS


SSTT







BTTB

SSSS
TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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