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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5cwwA_ | PDB header: transport protein | Chain: A: PDB Molecule: nucleoporin nup145n; | PDBTitle: crystal structure of the chaetomium thermophilum heterotrimeric nup822 ntd-nup159 tail-nup145n apd complex |
Added to library: Sat Sep 19 08:14:51 2015 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | G | P | H | M | G | A | Y | W | M | S | P | T | A | D | D | I | R | A | M | N | R | M | Q | R | Q | R | V | V | G | F | T | V | G | R | E | N | V | G | S | V | Q | F | K | V | P | V | D | L | S | N | I | N | L | D | D | L | F | G | T | I | V | I | L | E | P | R | S | A | T | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | T | T | G | G | G | S | B | T | T | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | B | T | T | S | G | G | G | B | T | T | T | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | Y | P | N | A | A | K | K | P | P | M | G | K | G | L | N | V | P | A | L | I | S | L | E | H | S | W | P | R | G | G | P | T | I | K | G | R | R | L | E | R | H | I | E | R | L | K | S | I | P | D | T | T | F | E | S | Y | D | P | E | T | G | V | W | A | F | S | V | E | H | F |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | G | G | G | T | T | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | T | T | S | S | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S |
Download: | PDB structure | FASTA sequence |
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