PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5cwkA_

Fold library id	PDB Header	Molecule	Title
c5cwkA_	PDB header: de novo protein	Chain: A: PDB Molecule: designed helical repeat protein;	PDBTitle: crystal structure of de novo designed helical repeat protein dhr53

Links to external resources
Added to library: Sat Dec 19 08:28:45 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S N D E K E K L K E L L K R A E E L A K S P D P E D L K E A V R L A E E V V R E R P G S N L A K K A L E I I L R A A E E L A K L P D P E A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T S T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K E A V K A A E K V V R E Q P G S N L A K K A L E I I L R A A E E L A K L P D P E A L K E A V K A A E K V V R E Q P G S E L A K K A L E I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T S S S S T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . .

Sequence E R A A E E L K K S P D P E A Q K E A K K A E Q K V R E E R P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	D	E	K	E	K	L	K	E	L	L	K	R	A	E	E	L	A	K	S	P	D	P	E	D	L	K	E	A	V	R	L	A	E	E	V	V	R	E	R	P	G	S	N	L	A	K	K	A	L	E	I	I	L	R	A	A	E	E	L	A	K	L	P	D	P	E	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T																					S	T	T	S																		T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	E	A	V	K	A	A	E	K	V	V	R	E	Q	P	G	S	N	L	A	K	K	A	L	E	I	I	L	R	A	A	E	E	L	A	K	L	P	D	P	E	A	L	K	E	A	V	K	A	A	E	K	V	V	R	E	Q	P	G	S	E	L	A	K	K	A	L	E	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	S	T																			S	S	S																		S	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Sequence	E	R	A	A	E	E	L	K	K	S	P	D	P	E	A	Q	K	E	A	K	K	A	E	Q	K	V	R	E	E	R	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S	S																			S