PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5cw9A_

Fold library id	PDB Header	Molecule	Title
c5cw9A_	PDB header: de novo protein	Chain: A: PDB Molecule: de novo designed ferredoxin-ferredoxin domain insertion	PDBTitle: crystal structure of de novo designed ferredoxin-ferredoxin domain2 insertion protein

Links to external resources
Added to library: Sat Sep 26 08:52:03 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M E M D I R F R G D D P E A Y Y K A L R E M I R Q A R K F A G T V T V T L I I R F R G D D L E A L E K A L K E M I R Q A R K F A G T V T Y T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T S
S
T S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L D G N D L E I R I T G V P P Q V I L E L V K E A I R L A K E F N I T V T V E L V I R I T G V P E Q V R K E L A K E A E R L A K E F N I T V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
S
T

. . . . . .

Sequence T Y T I R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	M	D	I	R	F	R	G	D	D	P	E	A	Y	Y	K	A	L	R	E	M	I	R	Q	A	R	K	F	A	G	T	V	T	V	T	L	I	I	R	F	R	G	D	D	L	E	A	L	E	K	A	L	K	E	M	I	R	Q	A	R	K	F	A	G	T	V	T	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S				T																T	T	S													S																		T	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	D	G	N	D	L	E	I	R	I	T	G	V	P	P	Q	V	I	L	E	L	V	K	E	A	I	R	L	A	K	E	F	N	I	T	V	T	V	E	L	V	I	R	I	T	G	V	P	E	Q	V	R	K	E	L	A	K	E	A	E	R	L	A	K	E	F	N	I	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S								S																				T	T													S																					T
	.	.	.	.	.	.
Sequence	T	Y	T	I	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)