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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cvlA_

Fold library idPDB HeaderMoleculeTitle
c5cvlA_PDB header: protein bindingChain: A: PDB Molecule: wd repeat-containing protein 48;PDBTitle: wdr48 (uaf-1), residues 2-580


Added to library: Sat Oct 10 11:02:54 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDI
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Known secondary structure (DSSP)




S


SBSS
TTTTTTS

SS

S




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA
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Known secondary structure (DSSP) GGGTTTS
TTTT


SS
TTTTTTS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRD
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Known secondary structure (DSSP)
SSS









S

TTSS
TTSS
TTT




SS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLIC
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Known secondary structure (DSSP) SSTTSTTTT

SS

TTS
TT
SSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHNFRASGPITPLCTQPDQVIKGGASIIQCHIL
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Known secondary structure (DSSP)
SS


SSSS

SSS

TTT




S
SS
S
B



 .........360.........370.........380.........390.........400.........410.........420
Sequence NDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCF
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Known secondary structure (DSSP) TTSSTT

TTTTS

T










TTSS
TTTSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHVNPMDKGNGYFQVPPHTPVIFGEAGGRTLFR
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Known secondary structure (DSSP)

TTTTT


SSS


TTT
GGGT







SS



TT
SSS
 .........500.........510.........520......
Sequence LLCRDSGGETESMLLNETVPQWVIDITVDKNMPKFN
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Known secondary structure (DSSP) GGGGGSS
TS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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