PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5cviB_

Fold library id	PDB Header	Molecule	Title
c5cviB_	PDB header: transcription regulator	Chain: B: PDB Molecule: slor;	PDBTitle: structure of the manganese regulator slor

Links to external resources
Added to library: Sat Aug 15 08:28:53 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X T P N K E D Y L K I I Y E L S E R D E K I S N K Q I A E K X S V S A P A V S E X V K K L L L E D L V L K D K Q A G Y L L T K K G Q I L A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
T T S
T T S T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S L Y R K H R L I E V F L X N H L N Y T A D E I H E E A E V L E H T V S D V F V E R L D K F L N Y P K V C P H G G T I P Q H G Q P L V E R Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T S
T T
B
T T
B
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R T T L K G V T E X G V Y L L K R V Q D N F Q L L K Y X E Q H H L K I G D E L R L L E Y D A F A G A Y T I E K D G E Q L Q V T S A V A S Q I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S T T
S
T T
T T
T T T T T T T T

. . . . .

Sequence Y I E K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	T	P	N	K	E	D	Y	L	K	I	I	Y	E	L	S	E	R	D	E	K	I	S	N	K	Q	I	A	E	K	X	S	V	S	A	P	A	V	S	E	X	V	K	K	L	L	L	E	D	L	V	L	K	D	K	Q	A	G	Y	L	L	T	K	K	G	Q	I	L	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T													T												T	T	S															T	T	S					T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	Y	R	K	H	R	L	I	E	V	F	L	X	N	H	L	N	Y	T	A	D	E	I	H	E	E	A	E	V	L	E	H	T	V	S	D	V	F	V	E	R	L	D	K	F	L	N	Y	P	K	V	C	P	H	G	G	T	I	P	Q	H	G	Q	P	L	V	E	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S															T	T	S													T	T				B		T	T			B				T	T						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	T	T	L	K	G	V	T	E	X	G	V	Y	L	L	K	R	V	Q	D	N	F	Q	L	L	K	Y	X	E	Q	H	H	L	K	I	G	D	E	L	R	L	L	E	Y	D	A	F	A	G	A	Y	T	I	E	K	D	G	E	Q	L	Q	V	T	S	A	V	A	S	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	S	T	T														S											T	T			T	T										T	T	T	T							T	T											T	T
	.	.	.	.	.
Sequence	Y	I	E	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)