PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5cv1A_

Fold library id	PDB Header	Molecule	Title
c5cv1A_	3.60	PDB header: hydrolase	Chain: A: PDB Molecule: p granule abnormality protein 1;

Links to external resources
Added to library: Sat Feb 6 08:18:43 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E P A D P F I S L L M D P L E E S V G K V V N H I A Q L F E E A S K N E G D E S L V L R S Q L G Y Q L F F L I V R S L A D G K R E V S K K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T S S
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L S G I P T S V R A E V F P G L Q R S V Y K S A V F L G N H I I Q V L L G E D W D V V G V A K D L E S A W K R R A I A E L I K K F Q V S I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S T G G G G T S
T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E Q C F D K P V P L I P Q S P L N N D A V I D N V N K A L Q F A L W L T E F Y N E T E A L G E L R F L D S T S K N L L V D S F K K F T H V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S S
S S T T
T T T
G G G T T
S S

. . . . . . . .

Sequence R I V E S L E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	P	A	D	P	F	I	S	L	L	M	D	P	L	E	E	S	V	G	K	V	V	N	H	I	A	Q	L	F	E	E	A	S	K	N	E	G	D	E	S	L	V	L	R	S	Q	L	G	Y	Q	L	F	F	L	I	V	R	S	L	A	D	G	K	R	E	V	S	K	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						T	S	S																							S	S																									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	G	I	P	T	S	V	R	A	E	V	F	P	G	L	Q	R	S	V	Y	K	S	A	V	F	L	G	N	H	I	I	Q	V	L	L	G	E	D	W	D	V	V	G	V	A	K	D	L	E	S	A	W	K	R	R	A	I	A	E	L	I	K	K	F	Q	V	S	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S									S	T	G	G	G	G	T	S																								T							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	Q	C	F	D	K	P	V	P	L	I	P	Q	S	P	L	N	N	D	A	V	I	D	N	V	N	K	A	L	Q	F	A	L	W	L	T	E	F	Y	N	E	T	E	A	L	G	E	L	R	F	L	D	S	T	S	K	N	L	L	V	D	S	F	K	K	F	T	H	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S	S	S				S	S	T	T			T	T																					T								G	G	G	T	T			S	S
	.	.	.	.	.	.	.	.
Sequence	R	I	V	E	S	L	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)