PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5cssA_

Fold library id	PDB Header	Molecule	Title
c5cssA_	2.17	PDB header: isomerase	Chain: A: PDB Molecule: triosephosphate isomerase;

Links to external resources
Added to library: Sat Jun 11 08:18:23 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M Y T A I V N L K T Y R E A T G A N F T R F M E K F E P V Q G K F E L I F S P S L L D L E K A A K C G K F R F F A Q H V D A E P Y G A Y T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G S T T T
S S
G G G
S S
B S
B
S S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H V P M D M M I D L G I T G S I L N H S E R R L P R D T I I N T L K K A S K L D F T I V L C V E N A E E A K Y F R E Y E P D F I A Y E P R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T
S
T T S
T T
S S T T
S
G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L I G G D V S V S T A K P E I I E D I V K I Y E G T G T S V L V G A G I K T G E D V R R S I G L G A R G I L V A S G V V K S A D P T K S L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G T T S S S
T T S S
S S
S T T
S T S S S

. . . .

Sequence S L I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	Y	T	A	I	V	N	L	K	T	Y	R	E	A	T	G	A	N	F	T	R	F	M	E	K	F	E	P	V	Q	G	K	F	E	L	I	F	S	P	S	L	L	D	L	E	K	A	A	K	C	G	K	F	R	F	F	A	Q	H	V	D	A	E	P	Y	G	A	Y	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T		G	G	G	S	T	T								T						S	S									G	G	G									S	S				B	S			B				S	S	S		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	V	P	M	D	M	M	I	D	L	G	I	T	G	S	I	L	N	H	S	E	R	R	L	P	R	D	T	I	I	N	T	L	K	K	A	S	K	L	D	F	T	I	V	L	C	V	E	N	A	E	E	A	K	Y	F	R	E	Y	E	P	D	F	I	A	Y	E	P	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B								T							S		T	T	S																	T	T								S	S									T	T			S							G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	I	G	G	D	V	S	V	S	T	A	K	P	E	I	I	E	D	I	V	K	I	Y	E	G	T	G	T	S	V	L	V	G	A	G	I	K	T	G	E	D	V	R	R	S	I	G	L	G	A	R	G	I	L	V	A	S	G	V	V	K	S	A	D	P	T	K	S	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	T	S	S	S																		T	T	S	S							S	S			S										T	T							S					T	S	S	S
	.	.	.	.
Sequence	S	L	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)