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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cskB_

Fold library idPDB HeaderMoleculeTitle
c5cskB_PDB header: ligaseChain: B: PDB Molecule: acetyl-coa carboxylase;PDBTitle: crystal structure of yeast acetyl-coa carboxylase, unbiotinylated


Added to library: Sat Oct 31 08:43:18 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPGHFIGLNTVDKLEESPLRDFVKSHGGHTVISKILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAM
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Known secondary structure (DSSP)

TTT

SSBSTTS


TT

B





S
TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKLSQSK
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Known secondary structure (DSSP)
TTBSS


SSGGGTTT
T
S

SSTTTT
TST
 .........150.........160.........170.........180.........190.........200.........210
Sequence RKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIPWSGTGVDTVHVDEKTGLVSVDDDIYQKGCCTSPED
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Known secondary structure (DSSP) T

SS

S
STT

B
SBTTTT




SSS



TS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GLQKAKRIGFPVMIKASEGGGGKGIRQVEREEDFIALYHQAANEIPGSPIFIMKLAGRARHLEVQLLADQ
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Known secondary structure (DSSP)
SSTT

SS
SSSSTT




S



T
 .........290.........300.........310.........320.........330.........340.........350
Sequence YGTNISLFGRDCSVQRRHQKIIEEAPVTIAKAETFHEMEKAAVRLGKLVGYVSAGTVEYLYSHDDGKFYF
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Known secondary structure (DSSP) TS



TT


S

SS
T



B
TTT

B
B
 .........360.........370.........380.........390.........400.........410.........420
Sequence LELNPRLQVEHPTTEMVSGVNLPAAQLQIAMGIPMHRISDIRTLYGMNPHSASEIDFEFKTQDATKKQRR
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Known secondary structure (DSSP)

S

TT


TT

GGG
TT

TT





TT

STT


 .........430.........440.........450.........460.........470.........480.........490
Sequence PIPKGHCTACRITSEDPNDGFKPSGGTLHELNFRSSSNVWGYFSVGNNGNIHSFSDSQFGHIFAFGENRQ
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Known secondary structure (DSSP)



SB
B
TTT
S
B





SS
SB
SS

TTS
S

BSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ASRKHMVVALKELSIRGDFRTTVEYLIKLLETEDFEDNTITTGWLDDLITHKMTAEKPDPTLAVICGAAT
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Known secondary structure (DSSP) T
SS

STST


TTTT






 .........570.........580.........590.........600.........610.........620.........630
Sequence KAFLASEEARHKYIESLQKGQVLSKDLLQTMFPVDFIHEGKRYKFTVAKSGNDRYTLFINGSKCDIILRQ
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Known secondary structure (DSSP) TT



GGGG
SSSSSTTSSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LSDGGLLIAIGGKSHTIYWKEEVAATRLSVDSMTTLLEVALPFEGMLPDFGSPVIEGTKPAYKFKSLVST
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Known secondary structure (DSSP)
SSS
SSS


B
SS

TT




B

S






SS



S
 .........710.........720.........730.........740.........750.........760.........770
Sequence LENILKGYDNQVIMNASLQQLIEVLRNPKLPYSEWKLHISALHSRLPAKLDEQMEELVARSLAVFPARQL
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Known secondary structure (DSSP) T


T
TTTTS
T




 .........780.........790.........800.........810.........820.........830.........840
Sequence SKLIDMAVKNPEYNPDKLLGAVVEPLADIAHKYSNGLEAHEHSIFVHFLEEYYEVEKLFNGPNVREENII
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Known secondary structure (DSSP) TS
TTT
SSSSTT
GGG
SSS

 .........850.........860.........870.........880.........890.........900.........910
Sequence LKLRDENPKDLDKVALTVLSHSKVSAKNNLILAILKHYQPLCKLSSKVSAIFSTPLQHIVELESKATAKV
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Known secondary structure (DSSP)
TT
TT
T

STTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence ALQAREILIQGALPSVKERTEQIEHILKSSVVKVAYGSEPDLNILKDLIDSNYVVFDVLLQFLTHQDPVV
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Known secondary structure (DSSP) TTSS

S








TTTTT
SS

GGGGG
S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence TAAAAQVYIRRAYRAYTIGDIRVHEPIVEWKFQLPSRAVSVSDLSSPLREGILMAVDHLDDVDEILSQSL
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Known secondary structure (DSSP) TTTS






STT





SSGGG
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence EVILSNVANVCVASTEGFESEEEILVRLREILDLNKQELINASIRRITFMFGFKDGSYPKYYTFNGPNYN
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Known secondary structure (DSSP) TT





TT

STT

SSS



SSS

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence ENETIRHIEPALAFQLELGRLSNFNIKPIFTDNRNIHVYEAVSKTSPLDKRFFTRGIIRTGHIRDDISIQ
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Known secondary structure (DSSP) B

TTTTS
TGGGGGG



SSSS
TT
TT






TTS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence EYLTSEANRLMSDILDNLEVTDTSNSDLNHIFINFIAVFDISPEDVEAAFGGFLERFGKRLLRLRVSSAE
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Known secondary structure (DSSP) TS

TT

S


TTTT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence IRIIIKDPQTGAPVPLRALINNVSGYVIKTEMYTEVKNAKGEWVFKSLGKPGSMHLRPIATPYPVKEWLQ
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Known secondary structure (DSSP)
TTT


SSSS


SS

SSS

TTTT
BTT






SS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence PKRYKAHLMGTTYVYDFPELFRQASSSQWKNFSADVKLTDDFFISNELIEDENGELTEVEREPGANAIGM
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Known secondary structure (DSSP) TS

GGG
TT



TTS
TTS



TT

SSS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence VAFKITVKTPEYPRGRQFVVVANDITFKIGSFGPQEDEFFNKVTEYARKRGIPRIYLAANSGARIGMAEE
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Known secondary structure (DSSP)

SS
TT

TTSSTT
B
T




SB




GG
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence IVPLFQVAWNDAANPDKGFQYLYLTSEGMETLKKFDKENSVLTERTVINGEERFVIKTIIGSEDGLGVEC
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Known secondary structure (DSSP) GTTS


S
SS
GGG




T
GGGSSS


SSS
SS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence LRGSGLIAGATSRAYHDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILTGAPAINKMLGREVYTSN
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Known secondary structure (DSSP) TTS

S
T
TT

SS
TTS




T
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence LQLGGTQIMYNNGVSHLTAVDDLAGVEKIVEWMSYVPAKRNMPVPILETKDTWDRPVDFTPTNDETYDVR
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Known secondary structure (DSSP) STTTTSSSSSTTS
SSTT







SS
SSS





BTTB


 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence WMIEGRETESGFEYGLFDKGSFFETLSGWAKGVVVGRARLGGIPLGVIGVETRTVENLIPADPANPNSAE
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Known secondary structure (DSSP) TTT
SS
TT

STTS
TTTT

S



TTSTT


 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence TLIQEPGQVWHPNSAFKTAQAINDFNNGEQLPMMILANWRGFSGGQRDMFNEVLKYGSFIVDALVDYKQP
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Known secondary structure (DSSP)
TT
TS








STTT

S
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence IIIYIPPTGELRGGSWVVVDPTINADQMEMYADVNARAGVLEPQGMVGIKFRREKLLDTMNRLDDKYREL
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Known secondary structure (DSSP)
TT
B

GGG
GGGSTTT

TT
B

SS
S

 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence RSQLSHQQISKQLADRERELLPIYGQISLQFADLHDRSSRMVAKGVISKELEWTEARRFFFWRLRRRLNE
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Known secondary structure (DSSP) T

TTSBT
SS
STT
 .........1970.........1980.........1990.........2000.........2010.......
Sequence EYLIKRLSHASRLEKIARIRSWYPASVDHEDDRQVATWIEENYKTLDDKLKGLKLES
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Known secondary structure (DSSP)


TSS
TTS
TT
TTTTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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