Fold library entry viewer: c5csaA_

Added to library: Sat Oct 31 08:21:04 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	K	P	D	P	T	L	A	V	I	C	G	A	A	T	K	A	F	L	A	S	E	E	A	R	H	K	Y	I	E	S	L	Q	K	G	Q	V	L	S	K	D	L	L	Q	T	M	F	P	V	D	F	I	H	E	G	K	R	Y	K	F	T	V	A	K	S	G	N	D	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																		T	T					G	G	G	G											S	S											S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	L	F	I	N	G	S	K	C	D	I	I	L	R	Q	L	S	D	G	G	L	L	I	A	I	G	G	K	S	H	T	I	Y	W	K	E	E	V	A	A	T	R	L	S	V	D	S	M	T	T	L	L	E	V	E	N	D	P	T	Q	L	R	T	P	S	P	G	K	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S											S	S	S						S	S	S											T	T							T	T											T	T					S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	F	L	V	E	N	G	E	H	I	I	K	G	Q	P	Y	A	E	I	E	V	M	K	M	Q	M	P	L	V	S	Q	E	N	G	I	V	Q	L	L	K	Q	P	G	S	T	I	V	A	G	D	I	M	A	I	M	T	L	D	D	P	S	K	V	K	H	A	L	P	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		T	T					T	T									T	T								S	S								S		T	T					T	T									S		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	M	L	P	D	F	G	S	P	V	I	E	G	T	K	P	A	Y	K	F	K	S	L	V	S	T	L	E	N	I	L	K	G	Y	D	N	Q	V	I	M	N	A	S	L	Q	Q	L	I	E	V	L	R	N	P	K	L	P	Y	S	E	W	K	L	H	I	S	A	L	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											T	T																			T	T								T	T										T		T															G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	L	P	A	K	L	D	E	Q	M	E	E	L	V	A	R	S	L	R	R	G	A	V	F	P	A	R	Q	L	S	K	L	I	D	M	A	V	K	N	P	E	Y	N	P	D	K	L	L	G	A	V	V	E	P	L	A	D	I	A	H	K	Y	S	N	G	L	E	A	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S																				S	S															S		T	T	T		S	S	S	T															T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	H	S	I	F	V	H	F	L	E	E	Y	Y	E	V	E	K	L	F	N	G	P	N	V	R	E	E	N	I	I	L	K	L	R	D	E	N	P	K	D	L	D	K	V	A	L	T	V	L	S	H	S	K	V	S	A	K	N	N	L	I	L	A	I	L	K	H	Y	Q	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																G	G	G			S	S															T	T														T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	C	K	L	S	S	K	V	S	A	I	F	S	T	P	L	Q	H	I	V	E	L	E	S	K	A	T	A	K	V	A	L	Q	A	R	E	I	L	I	Q	G	A	L	P	S	V	K	E	R	T	E	Q	I	E	H	I	L	K	S	S	V	V	K	V	A	Y	G	S	S	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T			S	T	T	T																S																		T		B	S	S	T	T				B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	R	S	E	P	D	L	N	I	L	K	D	L	I	D	S	N	Y	V	V	F	D	V	L	L	Q	F	L	T	H	Q	D	P	V	V	T	A	A	A	A	Q	V	Y	I	R	R	A	Y	R	A	Y	T	I	G	D	I	R	V	H	P	I	V	E	W	K	F	Q	L	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S											T		S	S							G	G	G	G	G		S																	T	T	T	S																		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	R	A	V	S	V	S	D	L	P	L	R	E	G	I	L	M	A	V	D	H	L	D	D	V	D	E	I	L	S	Q	S	L	E	V	I	L	S	N	V	A	N	V	C	V	A	S	T	E	G	F	E	S	E	E	E	I	L	V	R	L	R	E	I	L	D	L	N	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	T	T												S	S	G	G	G									G	G	G											S			T	T			S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	L	I	N	A	S	I	R	R	I	T	F	M	F	G	F	K	D	G	S	Y	P	K	Y	Y	T	F	N	G	P	N	Y	N	E	N	E	T	I	R	H	I	E	P	A	L	A	F	Q	L	E	L	G	R	L	S	N	F	N	I	K	P	I	F	T	D	N	R	N	I	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T											S	S	S										S	S	S			B			T	T	T	T	S									T	G	G	G	G	T	T									S		S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	Y	E	A	V	S	K	T	S	P	L	D	K	R	F	F	T	R	G	I	I	R	T	G	H	I	R	D	D	I	S	I	Q	E	Y	L	T	S	E	A	N	R	L	M	S	D	I	L	D	N	L	E	V	T	D	T	S	N	S	D	L	N	H	I	F	I	N	F	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S		T	T																	T	T	S																								S			T	T	B		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	F	D	I	S	P	E	D	V	E	A	A	F	G	G	F	L	E	R	F	G	K	R	L	L	R	L	R	V	S	S	A	E	I	R	I	I	I	K	D	P	Q	T	G	A	P	V	P	L	R	A	L	I	N	N	V	S	G	Y	V	I	K	T	E	M	Y	T	E	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T													T													T	T	T													B	T	T	B
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.
Sequence	N	A	K	G	E	W	V	F	K	S	L	G	K	P	G	S	M	H	L	R	P	I	A	T	P	Y	P	V	K	E	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S							S	S	S			T	T	T	T		B	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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