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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ci5B_

Fold library idPDB HeaderMoleculeTitle
c5ci5B_PDB header: sugar binding proteinChain: B: PDB Molecule: extracellular solute-binding protein family 1;PDBTitle: crystal structure of an abc transporter solute binding protein from2 thermotoga lettingae tmo (tlet_1705, target efi-510544) bound with3 alpha-d-tagatose


Added to library: Sat Jul 25 09:10:13 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SKTLTIWIGGQVAELDETWNSVIKTFEEKYGISVEVQLFGFDTYYDKLVTALQAGKGPDLAFADLGGWVP
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Known secondary structure (DSSP)
SGGGG


TTTTT


STTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TFAEKGWLEPXEEHLKNWEGTAQIWPNLWPTVTYKKIRYGLPWYTDCRLLLYNKAXFEKAGLNPDNPPKT
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Known secondary structure (DSSP) TT
B



TTGGGB
GGGGGGGTT


TT

TTS


B
 .........150.........160.........170.........180.........190.........200.........210
Sequence WDELLDAALKITDTKNRIYGYGVSGTKTEHTTLGYXXFLYAAGGKLLTDDYSKAAFDSPEGLKALKFYTD
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Known secondary structure (DSSP)
BGGGTBBS




SSSTT

SB
TTS
SB

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAKKYNVSPNAIQYHEDDYRNXXAQNRVAXAIGGPWSFPLIEAANPDIAGKYSVALHPYDAKPASVLGGW
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Known secondary structure (DSSP) TT

SS
TTT

TTTSB

TT
GGGTTS


BSSS


B
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALVIPSSSPNKEDAWKLAEYLTSFDVWXKWVEEKGGPXPTRXDVCKKSKLANDVKWQIIFETFPHAVARP
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Known secondary structure (DSSP)
BTT
S
TS

SSBTTGGGSGGG
B


 .........360.........370.........380.........390..
Sequence PIPQYPQISEQIQTXVQRVLLGELTPEEAIKIAAENVNKILG
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Known secondary structure (DSSP)
STTTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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