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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ch6B_

Fold library idPDB HeaderMoleculeTitle
c5ch6B_3.26PDB header: transcriptionChain: B: PDB Molecule: frigida;


Added to library: Sat May 28 08:24:03 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SVSELGFLCGMMRSRGLRKYIISHLSDVAKLREEVPAALKGAPKPAKLVLECIGRFFLQGSKAFGKATHM
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Known secondary structure (DSSP)
TT
GGGSGGGSSS



SS




 .........80.........90.........100.........110.........120.........130.........140
Sequence VPSRQASLLILEFFLLSDCTEMEPSVKEEADLAAVTWRKRLINEGGVSNASDIDARGLLLLVASFGIPAL
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Known secondary structure (DSSP)
TTTT




TT
TTS




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FRNEDLRNLIRLSCPKEISDALRRSRFLLARVPDVIQGMIKNQMNVEAVDFAYTFGLEEKFPIWKILTSF
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Known secondary structure (DSSP)

T
GGGGTT
SSTT
TT
TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LREHKEEWKRTREEDSPIRLKKANENYLSAMKSVTRCLEDHRVDPSKLLSGWHIDEKIIQLEKEMADLDK
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Known secondary structure (DSSP) S
SSS
TT

T
SS
 .....
Sequence KMEGK
Predicted secondary structure


SS confidence




Known secondary structure (DSSP) T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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