Fold library entry viewer: c5ch1B_

Added to library: Sat Oct 31 09:11:54 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	W	T	V	D	K	I	A	S	A	L	S	V	L	A	E	E	V	P	Q	N	H	S	R	L	V	N	F	L	L	E	E	T	E	K	R	A	P	Q	P	R	H	L	S	K	T	D	P	F	A	H	M	K	S	K	A	I	D	A	N	R	P	R	P	E	G	V	P	T	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T																				T						S			S	S		T	T	T	T								T	T	S				S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	K	F	K	Q	H	S	G	E	Y	G	K	S	R	N	S	G	R	R	F	Q	Y	P	V	V	C	I	K	P	D	R	E	P	V	P	P	Y	R	F	H	H	A	E	I	R	K	N	I	L	A	L	N	S	Q	L	N	F	V	P	H	L	R	D	V	D	P	N	S	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T			S	S	S																						S	S						S	S											S					S				S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	Q	K	Y	S	A	W	L	M	D	L	E	N	L	D	S	K	S	G	F	P	R	S	Q	K	I	A	K	R	A	Q	A	E	Y	A	A	T	L	A	P	Y	L	E	P	W	L	R	K	L	N	I	E	C	T	K	S	N	L	I	R	F	M	A	S	Q	P	E	T	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T																																T														T	S				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	K	S	N	L	L	D	T	Y	S	D	D	A	V	R	N	A	S	M	F	T	E	A	W	D	R	V	F	N	D	Q	R	R	V	A	L	R	D	I	L	M	L	D	K	N	V	E	P	I	F	E	A	L	M	Q	K	V	I	D	A	L	G	S	Y	T	T	L	G	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T																											S	T	T	T	G	G	G																					T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	C	F	S	H	D	C	E	H	G	E	I	E	R	D	N	Q	K	R	C	F	S	L	E	E	I	G	G	L	M	P	S	L	R	R	K	W	A	A	Q	I	E	Q	P	P	C	R	N	E	C	Y	I	H	G	T	P	P	W	S	E	N	E	V	G	T	L	E	W	M	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			S	S	S	S		S				T	T	S					S	S	G	G	G	G	T															T					T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	T	I	G	Y	S	L	R	P	E	C	F	V	G	A	I	L	R	P	C	W	D	V	H	R	K	L	Q	E	L	D	L	R	L	P	I	P	K	Q	K	S	L	P	W	Y	D	R	R	K	K	Q	L	M	S	D	W	A	D	A	T	I	T	H	E	H	A	V	R	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S			-								T			-								B	T	T			T	T	T	T				T	T							T	T		G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	A	P	C	H	H	D	G	P	C	T	A	A	N	G	C	P	C	A	S	A	G	T	H	P	V	L	C	E	R	F	C	L	C	T	A	E	E	C	P	L	K	F	T	G	C	A	C	H	S	S	G	K	T	C	L	Q	R	Q	G	R	P	C	I	C	V	Q	L	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S		S	S	T	T	T	T						T	S	S	S				B		T	T	S	S	S		T	T	T		T	T	B									S	S			S		S											T	T	B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	C	D	P	T	L	C	K	G	C	G	A	R	E	R	A	D	P	E	N	A	Y	D	E	V	L	H	S	T	G	C	Q	N	V	A	L	Q	R	G	A	A	K	A	V	V	L	G	K	S	Q	L	E	A	C	G	Y	G	L	F	A	A	E	D	I	E	E	G	E	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	S	T	T	T	T					T		G	G	G	T	T						T	S				S																	S	S	T	T								S	S		B		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	E	Y	T	G	E	L	I	S	H	D	E	G	V	R	R	E	H	R	R	G	D	V	F	D	K	V	S	Y	L	F	T	L	L	E	Q	E	G	I	W	V	D	A	A	I	Y	G	N	L	S	R	Y	I	N	H	A	T	D	G	N	I	M	P	K	I	M	Y	V	N	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T			T	T											T	T	T	T						S	S				G	G	G	G					S	S		S									T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	W	R	I	K	F	T	A	I	K	D	I	K	A	G	E	E	L	F	F	N	Y	G	D	N	F	P	N	L	T	K	K	L	P	L	L	V	P	K	T	T	Q	P	L	F	D	P	L	S	K	V	Q	L	L	P	G	Q	P	L	P	Q	H	P	I	D	D	S	W	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S		B		T	T		B							T	T											B					S	S					T	T	T			B			T	T	S	B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	K	H	R	D	N	L	Q	D	F	I	D	L	R	P	E	E	K	E	F	L	Q	E	W	D	A	F	I	L	R	R	H	I	S	S	E	Q	Y	L	P	R	Y	F	L	R	F	V	R	E	K	A	D	W	L	V	S	K	R	S	R	G	E	E	F	S	K	L	V	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T		S	S	S																	T	T	T				G	G	G																			S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.
Sequence	L	L	A	R	R	V	L	P	E	R	V	V	I	E	A	T	Q	V	L	N	D	A	R	G	R	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S																T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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